Rhizobium tumorigenes: PR017_13430
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Entry
PR017_13430 CDS
T08990
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtu03016
]
PR017_13430
Enzymes [BR:
rtu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PR017_13430
Transfer RNA biogenesis [BR:
rtu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PR017_13430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WFR94808
UniProt:
A0AAF1KQ69
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All DBs
Position
2742901..2743527
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AA seq
208 aa
AA seq
DB search
MATTIRYHEGDISDVAAARYSDAIAIDTETLGLIPRRDRLCVVQLSPGDGSADVIRIAAG
QTDAPNLVAMLADPNRQKIFHYGRFDIAVLFHTFGVTTVSVFCTKIASRLCRTYTDRHGL
KDNLKEMLEIDVSKAQQQTDWAADKLSQAQLEYAASDVLYLHALRDKLTYRLVRDVRMEH
AQACFEFLPTRAKLDLLGWQDTDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaccatccgctatcacgaaggcgacatttccgacgtggccgcagcgcgatat
tccgacgcgatcgcaatcgataccgaaacactgggcctgataccgcgccgcgatcgcctc
tgcgtcgtgcagctttcgcctggcgacggcagcgccgacgtcatccgcatcgccgccggg
caaacggatgcccccaacctcgttgccatgctcgcagatccgaaccgccagaagatcttt
cactacggccgatttgatattgccgtgctgttccatacgttcggcgtcaccacggtctct
gtcttctgcaccaagatagcctcgcgcctctgccgcacctacaccgatcgccacggcctg
aaggacaatctcaaggaaatgctggagatcgacgtgtccaaggcacagcagcagaccgac
tgggccgcagacaagctttcacaggcccagctcgaatatgcggcctcagacgtgctctac
cttcatgcgcttcgggacaagctgacatatcgcctggttcgcgacgtacgaatggagcat
gcgcaagcctgtttcgaattcctgccgacccgggccaagctcgatttgctcggctggcaa
gacaccgatattttcgcccacagctga
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