Rhizobium tumorigenes: PR017_13440
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Entry
PR017_13440 CDS
T08990
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PR017_13440 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rtu03011
]
PR017_13440 (rpsA)
Ribosome [BR:
rtu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PR017_13440 (rpsA)
Bacteria
PR017_13440 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
S1_2
DUF5446
Motif
Other DBs
NCBI-ProteinID:
WFR94810
UniProt:
A0AAF1KRR0
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All DBs
Position
complement(2745475..2747175)
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AA seq
566 aa
AA seq
DB search
MSVAATSHEDFASLLEESFAKNDLAEGYVTKGIVTAIEKDVAVVDVGLKVEGRIALKEFG
ARSKGNELKVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFN
QVKGGFTVDLDGAIAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQQVKVQIIRINQETHRISLGMKQLESDPWDGIQAKYPEGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTTQEVEVVVLEVDPTKRRISLGLKQTLENPW
QAFAHSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEYNKGDM
VKAVVLDVDIEKERISLGIKQLGKDAVGDAATSGELRKNAVVSCEVTAVNEGGIEVKLVE
HEDVSSFIRRADLSRDRDEQRPERFSVGQIVDARVTNFSKKDRKIMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKNRGE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgccacctcgcatgaggattttgcctccctgctcgaagagtcttttgcc
aagaacgatctggctgaaggctacgttaccaagggtatcgtcaccgccatcgaaaaagat
gttgcggttgtcgacgtcggcctcaaggtcgaagggcgcatcgcgctcaaggaattcggc
gcccgctccaagggtaacgaactgaaagtcggcgacgaagtcgaagtttacgtcgaacgc
atcgaaaatgcgctgggcgaagccgttctgtcgcgcgagaaggctcgccgcgaagagagc
tgggtcaagctcgaagccaagttcgaagccggagagcgcgtcgaaggcgtgatcttcaac
caggtcaagggcggcttcacggtcgatctcgacggtgccatcgccttcctgccacgctcg
caggtagacatccgcccgatccgcgacgtcacgccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgtcgcggcaacatcgttgtctcgcgtcgtaccgttctc
gaagaatcccgcgctgaacagcgttcggaaatcgttcagaacctcgaagaaggccaggtt
gtcgacggtgtcgtcaagaacatcaccgactacggtgcgttcgtcgacctcggcggtatc
gatggtctgctgcacgtgaccgacatggcatggcgccgcgtcaaccatccgtcggaaatc
ctgtccattggccagcaggtcaaggttcagatcatccgcatcaaccaggaaacccaccgt
atctcgctcggcatgaagcagctcgagagcgatccttgggatggcatccaggccaagtat
cctgaaggcaagaagatctccggtaccgtcacgaacatcaccgactacggtgcattcgtt
gagctggaacccggtatcgaaggcctgatccacatctcggaaatgtcctggacgaagaag
aacgtacaccccggcaagatcctgtcgacgacacaggaagtcgaagtggtcgttctcgaa
gtcgatcccaccaagcgtcgtatctcgcttggcctcaagcagaccctcgaaaacccatgg
caggcttttgcccatagccatccggccggcaccgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgaaggcgacgtcgacggcatggtgcacctctcc
gacctcgactggaaccgtccaggcgaacaggtcatcgaggagtacaacaagggtgacatg
gtcaaggccgtggttctcgacgtcgacatcgagaaggagcgtatctcgctcggcatcaag
cagctcggcaaggacgctgttggcgacgcagccacctcgggcgaactccgcaagaatgcg
gttgtctcgtgcgaagtgaccgcagtcaacgaaggcggcattgaagtgaagctcgtcgag
cacgaagacgtttcttcgttcatccgtcgcgccgacctgtcgcgcgatcgtgacgagcag
cgtcctgagcgtttctcggtcggtcagatcgtcgacgcccgcgtcaccaacttctccaag
aaggaccgcaagatcatgctgtccatcaaggcgctcgaaatcgctgaagagaaggaagcc
gtcgcacagttcggttcgtccgactccggcgcttcgctcggcgacatcctcggcgcggct
ctgaagaaccgcggcgaataa
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