KEGG   Rhizobium tumorigenes: PR017_14275
Entry
PR017_14275       CDS       T08990                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rtu  Rhizobium tumorigenes
Pathway
rtu00010  Glycolysis / Gluconeogenesis
rtu00020  Citrate cycle (TCA cycle)
rtu00260  Glycine, serine and threonine metabolism
rtu00280  Valine, leucine and isoleucine degradation
rtu00310  Lysine degradation
rtu00380  Tryptophan metabolism
rtu00620  Pyruvate metabolism
rtu00630  Glyoxylate and dicarboxylate metabolism
rtu00640  Propanoate metabolism
rtu00670  One carbon pool by folate
rtu00785  Lipoic acid metabolism
rtu01100  Metabolic pathways
rtu01110  Biosynthesis of secondary metabolites
rtu01120  Microbial metabolism in diverse environments
rtu01200  Carbon metabolism
rtu01210  2-Oxocarboxylic acid metabolism
rtu01240  Biosynthesis of cofactors
Module
rtu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rtu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rtu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PR017_14275 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PR017_14275 (lpdA)
   00620 Pyruvate metabolism
    PR017_14275 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PR017_14275 (lpdA)
   00640 Propanoate metabolism
    PR017_14275 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PR017_14275 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PR017_14275 (lpdA)
   00310 Lysine degradation
    PR017_14275 (lpdA)
   00380 Tryptophan metabolism
    PR017_14275 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PR017_14275 (lpdA)
   00670 One carbon pool by folate
    PR017_14275 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtu04147]
    PR017_14275 (lpdA)
Enzymes [BR:rtu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PR017_14275 (lpdA)
Exosome [BR:rtu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PR017_14275 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 HI0933_like Thi4 Lys_Orn_oxgnase GIDA DAO AlaDh_PNT_C FAD_binding_3 Amino_oxidase 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: WFR94957
UniProt: A0AAF1K3A4
LinkDB
Position
complement(2915044..2916450)
AA seq 468 aa
MSYDVIVIGTGPGGYVCAIKAAQLGMKVAVIEKRATFGGTCLNIGCIPSKALLHASEMFH
QAGHGMEALGIEVAAPTLNLPNMMAHKDATVKSNVEGVAFLFKKNKIDSFIGSGKIVSAG
KVSVTGDDGQVQEIEGKNIVIATGSDVAGIPGVHVDLDEKIIISSTGGIALEKVPATMVV
VGGGVIGLELGSVWSRLGAKVTVIEYLDTILGGMDGEVSKQFHRLLAKQGMDFHLGAKVT
GVEKSATGAKVTFEPAKGGEATSLDADVVLIATGRKPYTANLGLEEAGVVLDNRGRVEID
HHFATNVAGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQAGHVNYDVIPSVVYTQPEVA
SVGKTEEELKAAGIAYKVGKFPFSANGRARAMLATDGFVKILADKETDRVLGGHIIGFGA
GDMIHEIAVLMDFSGSAEDLGRVCHAHPTMSEAVKEAAMAAAFKPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcttatgatgtgatcgttatcggaaccggccctggcggctatgtctgcgccatcaag
gcagcacagctgggcatgaaggtcgccgtcatcgagaagcgcgcaacgttcggcggcacc
tgcctcaacatcggctgcatcccttccaaggccctgctgcatgcctccgagatgttccac
caggctggtcacggcatggaagcgctcggcatcgaggtcgctgccccaaccctgaacctg
cccaacatgatggctcacaaggatgccaccgtgaagtcgaacgtcgagggtgtcgcgttc
ctgttcaagaagaacaagatcgacagcttcatcggctcaggcaagatcgtctcggccggc
aaggtttcggtcaccggcgatgatggccaggtccaggaaatcgaaggcaagaacatcgtc
atcgccaccggctcagacgttgcgggcattccgggcgtccacgtcgatctcgacgagaag
atcatcatttcatccaccggcggcattgcgctggagaaggtccccgcgacgatggttgtc
gtcggcggcggcgtcatcggtctcgagctcggctccgtctggtcgcgtctcggcgccaag
gtcacggtcatcgaatatctcgacaccatcctcggcggtatggatggcgaggtctccaag
cagttccaccgcctgctcgccaagcagggcatggacttccacctcggcgccaaggtcacc
ggcgtcgagaagtcggcgacgggcgcaaaggtcaccttcgagccggccaagggcggcgaa
gcgacctcgctcgatgcagacgtcgtgctgattgccacaggccgcaagccgtacacggct
aatctcggcctcgaggaagccggcgtcgtgctcgacaacaggggccgtgtcgagatcgac
caccacttcgcgaccaatgttgccggcatctatgccatcggcgacgtcgtcaagggtccg
atgctcgcccacaaggcggaagacgaaggcgtcgcactggcggaaattctcgccggccag
gccggccacgtgaactacgatgtcatcccgagcgtcgtctacacccagcctgaagtcgct
tccgtcggcaagacagaggaagaactcaaggccgccggcatcgcctacaaggtcggcaag
ttcccgttcagcgccaacggccgcgcccgcgcgatgctggcgacggatggcttcgtcaag
attttggccgacaaggaaaccgacagggtcctcggtggccacatcatcggtttcggcgcg
ggcgacatgatccatgaaatcgccgtgctgatggatttcagcggctcggcagaagacctc
ggccgggtttgccacgcccatccgacaatgtcggaagccgtcaaggaagcggccatggct
gccgccttcaagccgatccatatgtaa

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