Rhizobium tumorigenes: PR017_14305
Help
Entry
PR017_14305 CDS
T08990
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00020
Citrate cycle (TCA cycle)
rtu00640
Propanoate metabolism
rtu00660
C5-Branched dibasic acid metabolism
rtu00720
Other carbon fixation pathways
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu01120
Microbial metabolism in diverse environments
rtu01200
Carbon metabolism
Module
rtu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PR017_14305 (sucD)
00640 Propanoate metabolism
PR017_14305 (sucD)
00660 C5-Branched dibasic acid metabolism
PR017_14305 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PR017_14305 (sucD)
Enzymes [BR:
rtu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PR017_14305 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
DapB_N
Motif
Other DBs
NCBI-ProteinID:
WFR94963
UniProt:
A0AAF1K3A2
LinkDB
All DBs
Position
complement(2922868..2923770)
Genome browser
AA seq
300 aa
AA seq
DB search
MSILINKNTKILVQGLTGKTGTFHTEQALAYHGTKMVGGINPKKGGETWAGSAGESLPIF
ATVAEGKEATGADASVIYVPPAGAAAAILEAIEAEIPLIVCITEGIPVADMIKVKARLDA
SKSRLIGPNCPGVMTPDECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT
AVGIGGDPVKGTEFIDILEMFLADEETKSIIMIGEIGGSAEEDAAQFIKDEAKRGRSKPM
VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgattaacaaaaacacgaagatcctggttcagggtctgaccggcaagacc
ggcaccttccacaccgagcaggcgcttgcctaccacggcaccaagatggtcggcggtatc
aaccccaagaagggtggcgagacctgggccggttcggccggcgaatccctgccgatcttt
gcgaccgttgccgaaggcaaggaagcaaccggcgcagacgcatcggtcatttacgtgccg
ccagccggcgctgctgctgccatcctcgaagccattgaagccgagatcccgctgattgtc
tgcatcaccgaaggcattccggtcgctgacatgatcaaggtcaaggctcgcctcgacgcc
tccaagtcgcgcctcatcggcccgaactgccccggcgtcatgacgccggacgagtgcaag
atcggcatcatgccgggctcgatcttcaagaagggctccgtcggcgtcctgtcgcgctcc
ggtacgctcacctatgaagccgttttccagacgaccaacgaaggcctcggccagacgacg
gctgtcggcatcggcggcgatccggtcaagggcaccgagttcatcgacatcctggaaatg
ttcctggctgacgaagaaaccaagtcgatcatcatgatcggcgaaatcggcggttcggca
gaagaagacgcggcgcagttcatcaaggacgaagccaaacgcggccgctccaagccaatg
gtcggcttcatcgctggccgcacggcacctcccggccgcacaatgggccatgccggcgcc
gtgatttccggcggcaagggtggcgcggaagacaagatcgctgcgatggaagcagcaggc
atccgcgtctcgccctctccggcccgcctcggcaagacgctggttgaagtcctcaagggc
tga
DBGET
integrated database retrieval system
