Rhizobium tumorigenes: PR017_14350
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Entry
PR017_14350 CDS
T08990
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00020
Citrate cycle (TCA cycle)
rtu00190
Oxidative phosphorylation
rtu00650
Butanoate metabolism
rtu00720
Other carbon fixation pathways
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu01120
Microbial metabolism in diverse environments
rtu01200
Carbon metabolism
Module
rtu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PR017_14350 (sdhA)
00650 Butanoate metabolism
PR017_14350 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PR017_14350 (sdhA)
00720 Other carbon fixation pathways
PR017_14350 (sdhA)
Enzymes [BR:
rtu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PR017_14350 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
WFR94972
UniProt:
A0AAF1K3A8
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Position
complement(2930025..2931881)
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AA seq
618 aa
AA seq
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MASTSSNQNGPSQNGKDYKYVDHAYDVIVVGAGGAGLRATLGMAEQGFKTACITKVFPTR
SHTVAAQGGIAASLRNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYG
VPFSRNEEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLKHNAEFFI
EYFALDLIMSEDGSKCIGVVAWCLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGD
GGGMVARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAK
DLASRDVVSRCMTLEIREGRGVGKNKDHIYLHLDHLDPAVLNERLPGISESAKIFAGVDV
TREPIPVLPTVHYNMGGIPTNYWGEVLNADGENPERILPGLMAVGEAGCASVHGANRLGS
NSLIDLVVFGRAAAIRAAEVIDRAAPIPQLNVAACEKIMDRFDKLRFSNGNTPTSVLREK
MQHAMQDDAAVFRTQESLASGCERMSAIWMELSDVKVTDRSLIWNSDLVETLELHNLMAN
AITTIYGAEARKESRGSHAREDFTDGPFGGRDDVNWRKHTLSWVNDAGKVKLDYRPVHTE
LIAEGMDPQKIEPKARVY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacctcatccaatcagaatggtcccagccagaatgggaaagactacaagtat
gtcgatcacgcctatgacgtgattgttgtcggtgccggcggcgcgggtctccgcgccacg
ctcggcatggccgaacagggtttcaagaccgcctgcatcaccaaggtttttccgacccgt
tcgcacacggtcgctgcacagggcggtatcgccgcgtcactgcgcaacatgacgccggac
agctggcaatggcatctctacgacaccgtcaagggctctgactggctcggcgacgtcgat
gccatgcagtacctgaccatggaagcgccgaaggcggtctatgagctcgagcattacggc
gttcccttctcgcgcaatgaggaaggcaagatctaccagcggccgttcggcggccatatg
cagaattacggcgaaggcccgccggtgcagcgcacctgtgctgccgccgaccgtaccggc
cacgccatcctgcacacgctttacggacagtcgctgaagcacaacgccgagttcttcatc
gaatacttcgccctcgacctgatcatgtcggaagacggcagcaagtgcatcggcgtcgta
gcctggtgcctcgatgatggaaccatccatcgcttctccgccaagatggtggtgctggcg
actggcggctatggccgcgcctatttctcggcaacctcggcccatacctgcaccggcgac
ggcggtggcatggtcgcacgtgccggcctgccgcttcaggacatggagttcgtgcagttc
catccgaccggcatctatggtgcgggttgcctcattaccgaaggcgcgcgcggcgaaggc
ggctatctcgtcaattcggagggagagcgcttcatggagcgctatgctccatcagccaag
gaccttgcgtcgcgcgacgtcgtctcgcgctgcatgacgctggaaatccgcgagggtcgt
ggcgtcggcaagaacaaggaccacatctacctgcatctcgaccatctcgatccggctgtt
ctcaacgaacgcctgcccggcatctcggaatcggcgaagatctttgccggcgtcgacgtg
acgcgcgagccgatcccggtcctgccgacggtgcactacaacatgggcggcatcccgacg
aattactggggcgaagtgttgaatgcggacggcgaaaatccggaacgcatccttccgggc
ctgatggcggtcggcgaagccggctgcgcatcggtgcatggcgccaatcgccttggctcc
aattcgctgatcgacctcgtcgtcttcggacgtgctgctgccatccgggccgccgaagtg
atcgatcgcgctgcgccgatccctcagctcaacgtcgctgcctgcgaaaagatcatggat
cgcttcgacaagctgcggttttcgaacggcaatacgccgacatctgtgctgcgcgaaaag
atgcagcatgccatgcaggacgacgctgccgtgttccgtacgcaggaatcgctggcctcg
ggctgcgagcggatgtcggcgatctggatggagctttccgacgtaaaggtcaccgaccgt
tcgctgatatggaactcggacctcgtcgagacgctcgaactgcacaacctgatggccaac
gcgatcaccacgatctatggcgcggaagcccgcaaggaaagccgcggtagccacgcccgg
gaagacttcaccgacggtcccttcggcggccgcgacgacgtcaactggcgcaagcacacg
ctctcctgggtcaacgacgccggcaaagtgaaactcgactaccgtccggttcacaccgag
ctgatcgccgaaggcatggatccgcaaaagatcgagccgaaggcgcgtgtgtattga
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