Rhizobium tumorigenes: PR017_14525
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Entry
PR017_14525 CDS
T08990
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtu03016
]
PR017_14525 (thpR)
Enzymes [BR:
rtu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PR017_14525 (thpR)
Transfer RNA biogenesis [BR:
rtu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PR017_14525 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WFR95006
UniProt:
A0AAF1KT14
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All DBs
Position
complement(2959676..2960269)
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AA seq
197 aa
AA seq
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MPRLFAALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IERPEFQIKLDGIGAFGSKKPHSVWAGVTPNPEMYALQGEIERICQRVGLSADPRKFMPH
VTLARLKSSRLDDVAHYLSGRGNFQTSLFTASRFVLLSSRESVGGGPYLTEEIFPLHEVR
TFPAVSSKDLQPVKSML
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttgccgccctcgaaattccccgtaacgcggcgatgagcctgtcgttg
ttgcgcggtggtctaccgggcgcccggtggattgacgtagagaactaccacatcaccttg
cgcttcatcggggacgtcgacgggcggaccgccgatgaaatcgtcgagcgcctggaccgg
atcgaaaggcccgaattccagatcaagctggatggcatcggtgccttcggctccaagaaa
ccgcactccgtctgggccggcgtcacgccaaatcccgaaatgtatgccctgcagggcgag
atcgagcggatttgccagcgggtcggcctgtcggcggatccccggaaattcatgccgcac
gttacgctggcccggttgaaatcgtcgcgtctggacgatgtcgcgcactatctctccggc
cgcggcaatttccagacatcgctgttcacggcgtcacgctttgtgctgctatcctctcgg
gaatcggtgggcggcggtccgtatctgacggaagagatttttccgcttcacgaagtgcga
actttcccggcggtttccagcaaggacttgcagccggtcaagagcatgctgtag
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