Rhizobium tumorigenes: PR017_15550
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Entry
PR017_15550 CDS
T08990
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03030
DNA replication
rtu03430
Mismatch repair
rtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PR017_15550 (holA)
03430 Mismatch repair
PR017_15550 (holA)
03440 Homologous recombination
PR017_15550 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtu03032
]
PR017_15550 (holA)
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_15550 (holA)
Enzymes [BR:
rtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PR017_15550 (holA)
DNA replication proteins [BR:
rtu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PR017_15550 (holA)
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PR017_15550 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WFR95192
UniProt:
A0AAF1K9K4
LinkDB
All DBs
Position
3188388..3189425
Genome browser
AA seq
345 aa
AA seq
DB search
MTEIKSHEFEGFLQTAARKHRLFVIYGPDRGLVSERAKQIAEKTGVDLSDPFSLVKLDVG
DLHNDPGRLIDETNAIGLFGGARLVWIRGAANEKSVVDGLQAIASNPPDTAFLIVEAGDL
KKTAALRKLADGNRAIMAIPCYADDARALNTLVDHELAHENLRITPAARHMLLELLGGDR
IASRNEVRKLALYCRGLGTIDEQHVVDIIGDASAVSADDAVDAILKGDSAGFLHATQKII
ASKTSIFLVLQGCLRQFQLLDVMRAEMDEKRLPAAQVLQTHGRHLHFRRKPTIEHALRVW
TSDAIGREMNRLQAAIFQTRQRQSLEDSIAMQTLLATTLQSARKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacggagataaaatcccacgaattcgagggatttttgcagacggccgcccgtaagcat
cggctgtttgtcatctatggccctgaccgcggcctcgtctccgagcgagcgaaacaaatc
gccgaaaagacgggggtcgatctgtctgacccgttttcgctagtcaagctggatgtcggc
gacctccacaacgacccaggtcgtctgatcgacgaaaccaacgccatcggcttgttcggc
ggtgcccgccttgtctggatacgtggtgcggccaatgaaaaatcggtcgtcgacgggctt
caggctatcgcttccaatccacccgacacggccttcctgatcgtcgaggccggcgatctg
aaaaagaccgcggctctgcgcaagcttgccgacggcaaccgtgcgatcatggccattccc
tgctacgcagatgacgcccgggcgctgaacacgctcgtcgatcacgaactggcccacgaa
aacctgcgcatcacgcccgctgcccgccacatgctgctggaactgctcggcggcgaccgg
atcgcctcacgaaacgaggtgcgcaagctcgccctctattgccgtggcctcggcacgatc
gacgaacagcatgtcgtcgacatcatcggcgatgccagcgcagtgtcggccgacgatgcg
gtcgatgccatcctcaagggcgactcggccggatttctgcacgcgactcaaaagatcatc
gcctcgaagacgtcgatttttctcgtgctgcagggttgcctgcggcaatttcagctgctg
gatgtcatgagggctgaaatggatgaaaaacgcctaccggcagcgcaggtgctgcagacg
cacgggcggcatctgcatttccggcgtaaaccaacgatcgaacacgcattgcgcgtctgg
acatcggacgcgatcggacgcgaaatgaacaggcttcaggccgcgatcttccagacacgc
cagcgccaaagcctcgaggacagcatcgccatgcagacattgctggcgacgacgctgcaa
tctgcgcgtaaggcctga
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