KEGG   Arminella tumorigenes: PR017_15580
Entry
PR017_15580       CDS       T08990                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rtu  Arminella tumorigenes
Pathway
rtu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PR017_15580 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtu03021]
    PR017_15580 (rho)
   03019 Messenger RNA biogenesis [BR:rtu03019]
    PR017_15580 (rho)
Transcription machinery [BR:rtu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PR017_15580 (rho)
Messenger RNA biogenesis [BR:rtu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PR017_15580 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA ATPase_2
Other DBs
NCBI-ProteinID: WFR95197
UniProt: A0AAF1K3P7
LinkDB
Position
complement(3195185..3196450)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVESASTLRKQELMFAILKVLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNDRFRMELDVPTTKDLSARVIDLVAPIGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNPDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagctgcaagaactgaaaagcaaatccccgaccgatttgctggctttc
gccgaatcgctcgaggtcgaaagcgccagcacgctgcgcaaacaggaattgatgtttgcc
atcctgaaggtgctggccagccaggacgtggaaatcattggcgaaggcgtggttgaagtc
ctccaggacggattcggtttcctgcgctctgccaatgcgaactatctgcccgggcccgat
gatatctacatttcgccctcccagatccgccgtttctcgctgaagaccggcgacaccgtc
gaaggcccgatccgtggacctaaggaaggcgagcgctattttgctctcctcaaggtcaac
acgatcaacttcgacgatcctgagaaaattcgccataaggttcacttcgacaacctgacg
ccgctttatccgaacgaccggttccgtatggaactcgatgtgccgacgaccaaggatctc
tctgcccgcgtcatcgatctcgtggcgccgatcggcaagggtcagcgcggcctcatcgtt
gccccgccgcgcaccggtaaaaccgtcctgctccagaacattgcgcactcgatcacggcc
aatcatcccgaatgctatctgattgtccttctcattgacgaacggcctgaagaagtgacg
gacatgcagcgctctgtgcgcggcgaagtcgtgtcatcaacctttgacgagccggcggtt
cgccacgtacaggtcgctgaaatggtaatcgagaaggcgaagcgtctcgtcgagcacggt
cgtgacgtcgtcatcctgctcgattcgatcacccgtctcggtcgcgcctacaacaccgtc
gtgccatcgtctggcaaggtcctgacgggtggtgtcgacgccaacgcgctgcagcgcccg
aagcgcttcttcggtgctgcacgaaatatcgaggaaggcggatcgctgacgatcatcgcg
acagcgttgatcgataccgggagccgcatggacgaagtcattttcgaagaattcaagggt
accggcaactcggaaatcgtgctcgaccgcaaggtcgccgacaagcgcatcttcccggcg
atggatatccttaagtccggtacgcgtaaggaagacctgctcgttccgcgtcaggatctg
cagaagatctttgttcttcgccgtatcctcgccccgatgggtacgacggatgcgatcgaa
ttccttatcgacaagctgaagcagacgaagaacaatccggatttcttcgactcgatgaat
acttga

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