Rhizobium tumorigenes: PR017_15715
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Entry
PR017_15715 CDS
T08990
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_15715 (addA)
Enzymes [BR:
rtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PR017_15715 (addA)
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PR017_15715 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WFR95223
UniProt:
A0AAF1KFH6
LinkDB
All DBs
Position
complement(3220168..3223719)
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AA seq
1183 aa
AA seq
DB search
MSELAELPEGDDAGTWIGWTTVQQSLASDPTRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFDRLAEWATLPDDALIKRITDVEGAVPDVFKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLADARRSLLTAT
TPEDDAALAEAFAHVLDLGDESGLETLLGEIIAHRNAIRRFALDAEQRGGLDKVMRQRLG
LSATETEADIAQQFWPLRGLSGAVLDRYLELADSKGGSKAQEVAYGLRLVMRALDPSERV
EILGKIMLTAKGEPKADGQFVIKAMLVEAPELTDAIATARAHVVDCRDRLKRMQMYRATR
AALTLADRLNADYAELKKQRSQLDFEDLITRTADLLTRSGVGPWIHYKLDQGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGASARPTLRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVLASGQAFSPVRLPLSFRSTSDVLSAVDHVFSTPDNARGLSATDEAVVHRSSRIGHP
GEVDLWHMIAPEPAAKEEDWTAPFDSTPESAPAAVLARRMAHVMDTLVGRESIIDKGKTR
LIEAGDILVLVRKRDAFVNALTRALKKRGNIAVAGADRLVLTSHIAIQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEDDVFMVAALRGDGTSVWKHLQAFAADGKDTFADTVERLKLF
MTLSKTYSVHDLFARILGSHGGRRQFLARLGSEVSDILDEFLTFALDHETSGLPGLQSFV
STLELEAPVVKREQDKGRNEVRIMTVHAAKGLEAPIVFLVDGGSKSFTSSHLPKLRLLEG
RGEEVPMPAWLPLSSLGNTLTQANASRIQGQAEEEYRRLLYVGMTRAADRLIVCGYRGVR
QNPDIWHSMIATALGQHPKRCTEATFKGPDGDWTGLRWRVGGMAKDLETAVSTEARKDTT
ALPPALLQPLPPPRHLPRPLSPSGAGTIIDDEAGNLAVTSPLFGDKGASDRALEKGRLVH
RMLQMLPDLLPADRADAAARYAERTTRFWPATERQALVASVLALMAHEDLMGVFSSHAQA
EVSIMGTLALDRQTYAVSGRVDRLAVLDDRVVILDYKTNRVPPATADAIPFAHKAQLAIY
REILAPLYPGKRIDCVLVYSESATVHTLSEAALRSALAELMTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactggcagagcttccggaaggcgacgatgccgggacctggatcggctggaca
accgtccagcaatcgctggcctccgatccgacccggtctgcatgggtctcggccaatgcc
ggctccggcaagacgcatgtgctgacgcagcgggtgatccggctgctgctggcgggcgcg
cggccttcggcgatcctgtgcctgacatacaccaaggcagccgcatccgagatgtcgaac
cgcgtcttcgaccggcttgccgaatgggcaacactgccggacgacgcgctgatcaagcgc
attaccgatgtcgagggagctgtgccggacgtcttcaagctggcagaggcgcggcggctt
tttgctaaggccttggaaacgccgggcgggctgaagatccagaccatccatgccttctgc
gaggcgctactgcaccagtttccgctcgaagccaatgtcgccggtcatttttcggtgctg
gacgaccgcgctgcgacgacgctgctggcggacgcccgacgctccctgctgacggcaacg
acgcctgaagacgatgcggctctggcggaggcctttgcccatgtgctcgatctcggggac
gaatccggtctcgagacgctgctgggcgagatcattgcccaccgtaacgccatccgtcgc
ttcgcgctcgatgcggaacagcgcggcggcctcgataaggtgatgcgccagcggctgggg
ctgtcggctaccgagacggaagccgacatcgcacagcagttctggccgctgaggggacta
tcgggtgcggtgctggaccgttatcttgagctcgcggacagcaagggtggcagcaaggcc
caggaagtcgcctacggcctgaggctggtcatgcgcgcgctagatcccagcgagcgtgtc
gaaatccttggaaagatcatgctgaccgccaagggcgagccaaaagccgatggccagttc
gttatcaaagcaatgcttgtcgaggcgccggagctgacggatgccatcgccacggcgcgc
gcccatgtcgtggactgccgcgacaggctgaaacgcatgcagatgtaccgcgctacacgc
gccgcgctaacgcttgccgaccggctgaacgccgattatgccgaactcaagaaacagcgc
agccagctcgacttcgaggacctgatcactcgcacggccgatcttttgacgcgcagcggt
gtcggcccgtggatccactacaagctggaccagggcatcgaccatattctcgtcgacgag
gcgcaggataccagcccgatccagtggagtgtcatccagtctctggccgaagattttttc
tccggtgccagcgcccggccgacgctgcggacgctgtttgccgtcggcgacgagaaacag
tcgatctactccttccagggcgcgcggccggagcggttttccgaggagagcgaccggacg
cggcgtcgcgtgcttgccagcggccaggcgttttcgcccgtgcggctgccgctgtcgttc
cgctcgacatcggacgtgctatcagccgtcgaccatgttttttcgacgccggacaatgcc
aggggcctcagcgccaccgatgaggccgtcgttcatcgatccagccgtatcggacatccc
ggggaagtcgacctctggcacatgatcgcgcccgaacctgccgccaaggaagaggactgg
acggcgcccttcgattcgacgcctgaaagcgcgccggccgcggttctcgcgcgacgcatg
gctcatgtgatggatacgctggtcggccgcgaaagcattatcgacaagggtaagacgcgg
ctgatcgaggcgggcgatatcctcgtgctggtgcgcaagcgcgatgcgttcgtcaacgca
ctcacccgtgcgctgaagaaacgcggcaacattgccgttgccggtgccgaccggctggtg
ctgaccagccatatcgccatccaggatctgctggcgctcggccgcttcctgcttctgccg
gaggacgacctgtcgctggcggcggtgctgaaaagcccgctattcgacctttccgaggac
gacgtgttcatggtggcggcactgcgcggcgatggcacaagtgtctggaagcatctccag
gcttttgcagccgacggaaaggatacctttgccgatacagtcgagcgactgaagctgttt
atgacgctttcgaagacctattcggtccacgatctctttgcccgcattctcggcagccat
ggcggtcggcgtcaattcctggcgcggcttggcagcgaggtcagcgacatcctcgacgag
ttcctgacatttgcgctcgaccatgagacatcggggctgcccggtttgcaatccttcgtc
tcgacgctggaactcgaagcaccagtcgtcaagcgcgagcaggacaagggccgcaatgag
gtgcggatcatgacggtgcatgccgccaaggggctggaggcgccgattgtctttctcgtc
gatggcggctccaaatccttcacttccagccatctgccgaagctgcggctgctggagggg
cgcggcgaagaggtgccgatgccggcctggctgccgctgagttcgctcggcaacacactg
acccaggctaatgccagccgcatccagggccaggcggaggaggaatatcgccggctcctc
tatgtcggcatgacgcgggcggccgacaggctgatcgtttgtggctatcgcggcgtgcgc
cagaaccccgatatctggcacagcatgatcgcgaccgcactcggccagcatcccaagcgc
tgtactgaggcgacgttcaagggacctgacggcgactggaccggcctgcgctggcgcgtc
ggggggatggcaaaggatctcgaaaccgcagtgtcgacggaggcacgaaaggacacgacg
gcgctgccgcctgccctgttgcaaccgcttccgcccccccgccatctcccgcgtccgctg
agcccgtctggagcaggcaccatcatcgatgacgaagctggaaatctggcggtcacttcc
ccgctgttcggcgacaagggtgcctccgaccgggcgctggaaaagggccgactggtccac
cgtatgctgcagatgctgccggatctgcttccggccgatcgcgccgacgcagccgcgcgc
tatgccgaacgcaccacgcgcttctggccggcaacggagcgccaggcgctggtcgcctca
gttttggcgctgatggcgcacgaggacctgatgggggttttcagcagccacgcacaggca
gaagtttcgattatgggtacgcttgcgctcgaccggcagacctatgcggtctccggccgc
gtcgataggctggcggtactggacgatcgtgtggtgatcctcgactacaagaccaaccgc
gtgcctccggcaacggcggacgccattcccttcgcgcacaaggcacagctggcgatctac
cgcgagatcctggcgccgctctatccgggcaagcgcatcgattgcgtgctggtctactcc
gagagcgcgactgtccacacgctctccgaggcagcgctaagatcggcgcttgccgaactc
atgacaaagtga
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