Rhizobium tumorigenes: PR017_15720
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Entry
PR017_15720 CDS
T08990
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_15720 (addB)
Enzymes [BR:
rtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PR017_15720 (addB)
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PR017_15720 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WFR95224
UniProt:
A0AAF1K6Z3
LinkDB
All DBs
Position
complement(3223712..3226909)
Genome browser
AA seq
1065 aa
AA seq
DB search
MKHRQRILTIPAGLPFLATLAAALCDGRLTEHFRHDPADPLSLAKVTIYLPTRRAARVLR
SAFVDLLGGQSAILPVIRPLGETDEDSGYFDEDLPATADLLQPLSNTARLLELARLILAW
RNKLPQIVRDIHSDSPLVAPASPADAIWLARNLAELIDSIETEDRDWADLATLDAQDHAL
WWQLTAEFLQIASAFWPARLDELCRSSPARHRNAILRAEAKRLANAQPTGPIIIAGSTGS
VPATAELIAAVAALPQGVIVLPGLDQTMSDEDWAMVAPIAGIADRVDPASRSHPQYGLAH
LLRQLKTERTEVDTIETAPADLQRRAEILSRALAPAKATSGWGDWQKTLPPGAFRAAFAD
VSLIEAANEREEATAIAIALRLALEKPGRNGNESQAALITPDRDLARRVTAELARFGIIA
DDSAGTPLSSTPQGSLLTLLLEATLRPGDPVAIVSLLKHPLASFGLERSVLDHAVDALEL
LALRGGVGEVDINTLEPLLEQRLADQENDRHAPRWRDSLPPEAASMAAVLANRVRLATEP
LAGALVRRRPEDRRLTTSFTLSEWAERTGRALEAVVADEKGDLAALWSSEAGDALATVLR
EVMTTDGQMEADGPQWIDIMMALSAGQAVKPRALSHPRLFIFGTLEARLQSVDTLILGGL
NEGSWPGQTANNPFVSRMMKTEIGLEPPERRIGQLAHDFEMANGTADLIYSRALRQGSTP
TVASRWLQRLMALGGKEFTEELKMRGDCFRDWAALIDAGDRQAPAQRPSPKPPAAMQPKS
YSFSEVGRLRRDPYAIYARRVLRLDPVNPFNSDPGAAERGTLYHRIVDRFTREGHLATAP
DALKAMERVLTELFDAEQLPPHIDAVWRPRFREVARAFLNWEKARQPQIRQTFTEVRAAV
DLEAAGIRLTGVADRIDLKGGKAADIIDYKTGFNPTPQQARALLDPQLALEAYALQAGAF
RDVGTLTPENLLYVRLRPGDRFREDQVNNELAKASARTQPKSALDLGHESIEQLSQFVLL
LRSGEKGFASRLIPAQQQEFGGDYDHLARVSEWSTAEAEEAADDE
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccggcagcgcatcctgacgataccggcgggactgcccttccttgcgacgctt
gcggcggcgctgtgcgacgggcggctgaccgaacactttcgccacgatcctgccgatccg
ctgtcccttgccaaggtaacgatctatctgccgacacgccgtgcagcccgcgtgctgcgc
tccgcctttgtcgatctgctcggcggccaatcggcgatcctccccgtcatccggcccctt
ggcgagaccgatgaagatagcggctatttcgacgaggacctgccagccaccgctgacctg
cttcagccgctctcgaataccgcccggctgctagaacttgcccgcctgatccttgcgtgg
cgcaacaagctgccgcagatcgtccgtgacatccactccgattcaccgctggtggcgcct
gccagcccggccgatgcgatctggcttgcgcgcaatcttgccgaactgatcgattcgatc
gagacggaagaccgcgactgggctgatctcgcgacgctggatgcccaggatcatgctctc
tggtggcaattgacggccgaatttctgcagatcgccagcgccttctggccggcccgcctg
gacgaactctgccggtcctcgccggcccggcatcgcaatgccatactgcgcgccgaggcg
aagcggctagcaaatgcgcagcccacgggaccgatcatcatcgccggttcgacaggttcc
gtgccggccaccgcagagctgattgccgccgtcgcagcgctgccgcaaggcgtcatcgta
ctgccgggcctcgaccagacgatgtccgatgaggactgggccatggtcgcgccgattgct
ggcattgccgatcgggtcgatccggccagccgcagccatccacagtacggccttgcgcac
ctgttgcggcaactgaaaacggagcgcaccgaggtcgatacaatagagacggcgccggcc
gatctgcagcggcgtgccgaaatcctgtcccgtgcgctggcgccagccaaggctacgagc
ggctggggagattggcaaaagacgctgccgcccggcgcgtttcgcgcggcgttcgccgat
gtctcgctgatcgaggctgcgaacgagcgcgaagaggcgacggccatcgcgattgccctg
cggctggcgctggaaaagcctggccgtaacggcaatgaaagccaggcggcgctgattacg
cccgaccgggacctggcgcgtcgagtgacggctgaactcgcccgcttcggcatcatcgcc
gatgattcggcaggcacgccgctatcctccacgccgcaaggcagcctgttgacgctgctg
ctcgaggcaacgctcaggcccggcgaccccgttgccatcgtcagcctgctcaagcacccc
cttgcgagcttcgggcttgaacgctctgtgctggatcatgcggtcgacgcgctggagttg
ctggccctgcgcggaggcgtcggcgaggtcgacatcaatacgctggagcctctgctggaa
cagcggctggcggaccaggagaacgatcgccatgcaccgagatggcgcgacagcctgccg
ccggaagcggcttccatggcggctgttctggccaatcgtgtgcggcttgcgaccgagccg
ctggctggcgccttggtgcgacgccgccccgaggatcggcggctgacgaccagcttcaca
ttgtcggaatgggccgagcgcaccgggcgagctctggaggcggtggttgccgacgagaag
ggcgaccttgcggcgctctggtcttccgaagcgggcgatgcgctggcgaccgtactgcgc
gaagtgatgacgaccgatggtcagatggaagccgatggcccgcagtggatcgacatcatg
atggcactttccgccggccaggcggtcaaaccccgggcgctcagccatcccaggctgttc
atcttcggtacgctggaagcccggttgcagagcgtcgacactctcatcctcggaggcctg
aacgagggctcgtggcccggacagacggccaacaacccattcgtgtcgcggatgatgaag
acggagatcggcctggagccgccggagcgacgcatcggccagctggcccatgacttcgag
atggcaaacggcacggcggaccttatctactcgagggctctacggcagggctctaccccc
acagtcgcctcacgctggctgcagagacttatggcgctgggcggcaaggaatttaccgaa
gagctgaaaatgcgcggcgattgctttcgcgactgggcagcgctgatcgatgccggcgac
cgccaggcaccggcgcagcgtccctcgcccaagccaccggcagcgatgcagccgaaaagc
tattcgttcagcgaggtcggacgcctgaggcgcgatccttacgcgatctatgcccgccgc
gtcctccggctcgacccggtcaacccgttcaacagcgaccccggcgctgccgagcgcggc
acgctctatcaccggattgtcgatcgcttcacccgtgagggccatctggcgacggcgccg
gatgccttgaaggcaatggaacgcgtcctgacggagctgttcgacgccgagcagttgccg
ccgcatatcgacgcagtctggcgcccgcgctttcgcgaggtcgcacgggcctttctcaac
tgggaaaaggcccggcagccgcagatccgccagacatttaccgaagtccgcgccgccgtc
gatctcgaagccgccggcatccggctgaccggcgttgccgaccggatcgacctgaagggc
ggcaaggcggccgatatcatcgactacaagaccggcttcaatccgacgccgcagcaggcc
cgggcgctgctcgatccgcagctggcactcgaggcctacgcgctgcaggccggtgccttt
cgcgatgtcgggactttgacgccagaaaacctgctttatgtgcgcctaaggccgggcgat
cgattcagggaggatcaggtcaacaacgagctcgccaaggccagcgcccggacacagccg
aaatcggcgctcgatctcggccacgaatcgatcgaacagctcagccagtttgtccttctg
ctgcgctccggcgaaaaagggtttgcctcgcggctgatcccggcccagcagcaggaattc
ggcggcgattacgaccatctggcacgggtgtcggaatggtcgacggccgaagcggaagag
gctgcagacgatgagtga
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