Rhizobium tumorigenes: PR017_16295
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Entry
PR017_16295 CDS
T08990
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03030
DNA replication
rtu03410
Base excision repair
rtu03420
Nucleotide excision repair
rtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PR017_16295 (polA)
03410 Base excision repair
PR017_16295 (polA)
03420 Nucleotide excision repair
PR017_16295 (polA)
03440 Homologous recombination
PR017_16295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtu03032
]
PR017_16295 (polA)
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_16295 (polA)
Enzymes [BR:
rtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PR017_16295 (polA)
DNA replication proteins [BR:
rtu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PR017_16295 (polA)
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PR017_16295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PR017_16295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
WHD_BrxR
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WFR97333
UniProt:
A0AAF1K6U3
LinkDB
All DBs
Position
3343277..3346270
Genome browser
AA seq
997 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLRDARNTDVGVT
PTHFAVIFDYSSKTFRNDLYHLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARLAEATGADVTIISSDKDLMQLVTPNVHMYDAMKDKQIGVPDVVEKWGVAPE
KMIDLQALTGDSTDNVPGIPGIGPKTAAQLLEEFGDLETLLSRAGEIKQQKRRESIIANA
DLARLSRQLVKLRTDVPLDVPLEDLTLEPQDGPKLIAFLKAMEFTSLTRRVADATGANAA
GIEAAVVAVELVAEAHGPDMDTLASVTEGERSEEAIKSSPTDPLAVEAPHRGATPTDLAR
SRAESFAAAKLDASAYVTVRDLATLSNWIAACRETGLVAFDTETTSIDVMQADLVGFSLA
YADPADASGLTIHAAYVPLAHKTGSEDLFSDGVKLAPDQIPMDDALALLKGLLEDPSVLK
VAQNLKYDYLLMKRYGIITWGFDDTMLMSYVLDAGATTHGMDTLSERWLGHKPIAFKDVA
GSGKSLVTFDRVAIDKATAYAAEDADVTLRLWMVLKPRLAAQKLTSVYERLERPLVPVLA
RMEERGITVDRQILSRLSGELAQKAAAFEDEIYELAGERFNIGSPKQLGDILFGKMGLAG
GGKTKTGQWSTSASVLEDLAAEGLPLPRKIVDWRQLTKLKSTYTDALPGYIHPLTKRVHT
SYSLAATTTGRLSSSEPNLQNIPVRTAEGRKIRTAFVSTPGHKLLSADYSQIELRVLAHV
ANIPQLTQAFSDGVDIHAMTASEMFGVPVEGMPSDVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGEYIKRYFERFPGIKDYMEATKAYARDKGYVETIFGRRIHYPEIRSSNPSMRA
FNERAAINAPIQGSAADVIRRAMIQIEPALSEAGLGERVRMLLQVHDELIFEVEDGDVER
TQPVIVSVMENAAMPAVEMSVPLKVDARAADNWDEAH
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtgatcatctcttcctcgtcgatggctcgggcttcattttccgcgccttc
cacgccattccgccgctcaaccgcaaatccgatggtttgccggtgaatgccgtgtcggga
ttttgcaacatgctgtggaagttgctgcgtgacgcgcgcaacaccgatgtcggggtaaca
cccacccattttgccgtcatattcgactattcctcaaagacgttccgcaacgatctctac
catctttacaaggccaaccgctcggcgccgcccgaggacctggtgccgcagttcggtctg
atccgcgaggcgacccgcgccttcaatcttccgtgcatcgagaccgagggtttcgaagcc
gacgatatcattgccacctatgcgcggctggccgaagccaccggcgccgatgtcaccatc
atctcgtccgacaaggacctgatgcagttggtgacgccgaacgtgcatatgtacgacgcg
atgaaggacaagcagatcggcgttcccgatgtcgtcgagaaatggggcgtcgcgccggag
aagatgatcgatctgcaggcgctgaccggtgattccactgacaatgtgccgggcattccc
gggatcggtccgaagaccgcagcccagcttctggaagagttcggagatctcgaaacgctg
ctgtcgcgggccggcgagatcaagcagcagaaacgccgcgaaagcatcattgccaatgcc
gatctcgcacggctgtcgcgccagttggtcaagttgcgcaccgacgttccgctcgacgta
ccgctcgaggacctgacactcgagccgcaggatggcccgaaactcatcgccttcctgaag
gccatggaattcacctcgctgacccgccgcgtcgccgatgcaacaggtgcgaatgctgct
ggcatcgaggcggcggtcgtcgccgtcgagctggttgccgaggctcacggccccgacatg
gacacgctcgcctcggtcaccgagggagagcgctccgaagaggcgatcaagtcgtcgccg
accgatccgctggcagtcgaggcgccgcatcggggtgcaacgccaaccgatcttgccaga
agccgcgccgaaagtttcgccgccgccaaactcgatgcctctgcctatgtcaccgtccgc
gaccttgcaacgctctcaaactggattgccgcctgccgtgagaccggcctggtcgccttc
gacacggagaccacctcgatcgatgtcatgcaggcggatctggtcggtttctcgcttgcc
tacgccgatcccgccgatgcgtcgggcctcaccatccacgccgcttatgtgccgcttgcc
cacaagaccggcagcgaggatctgttcagcgacggcgtcaagctggcgccggaccagata
cccatggacgatgcactggccctgctgaagggactgctggaggacccgtccgtcctcaag
gtggcccagaacctcaaatacgactacctgctgatgaagcgctacggcatcatcacctgg
gggttcgacgacaccatgctgatgtcctacgtgctcgatgccggtgccacgacccatggc
atggatacgctgtccgagcgctggctcgggcacaagcccatcgccttcaaggatgtcgcc
ggcagcggcaagtcgctcgtcaccttcgaccgtgtcgccatcgacaaggccacggcctat
gccgccgaggatgccgatgtgacgctgcggctgtggatggtgctgaagccgcgcctcgcc
gcgcagaaactgacctcggtctatgagcgcctggagcggccgctcgtgccggtgctggcc
cgcatggaagagcgcggtatcactgtcgatcgccagatcctgtcacggctctccggcgaa
ctcgcccagaaagcggcagccttcgaggacgagatctatgaactggccggcgagcgcttc
aacatcggctcgcccaagcaactcggtgatattttattcggcaagatgggccttgccggg
ggcggcaagactaagaccggacagtggtccacctcggcaagcgtgctcgaggatctggcc
gccgagggtctgccgttgccgcgcaagattgtcgactggcgccagttgaccaagctgaag
tcgacctacaccgacgcactgccaggctacatccaccccttgaccaagcgcgtccacaca
tcctactcgctggccgcgaccaccaccggccggctgtcgtcgtccgagccgaacctgcaa
aatattccggtgcgcaccgctgaaggccgcaagatccgcacggccttcgtttcgacaccc
ggtcacaagctgctgtcggccgattacagccagatcgagctgcgcgtgttggcccatgtc
gccaatattccgcagctgacccaggcgttttccgacggcgtggacatccatgcgatgacg
gcctcggagatgttcggtgtgccggtcgagggcatgccgtcggacgtgcgccgtcgcgcc
aaggcgatcaacttcggcatcatctacggcatctcggctttcggccttgccaaccagcta
tcaatcgagcgctccgaggccggtgaatacatcaagcgctacttcgagcgcttccccggc
atcaaggactacatggaggccaccaaggcctatgcccgggacaagggctatgtcgagacc
atcttcggccgccgcatccattatccggaaatccgctcgtccaatccttcgatgcgggct
ttcaacgaacgcgccgccatcaatgcaccgatccagggttcggccgcagacgttatcagg
cgagcgatgatccagatcgagccggcattgtctgaagccgggctcggcgagcgcgtccgc
atgctgctgcaggtccatgacgaattgattttcgaagtagaggatggcgatgtcgagcgg
acccagccggtcatcgtctccgtcatggaaaatgccgccatgccggccgtcgagatgagc
gtgccgctcaaagtcgatgcgcgcgctgccgacaactgggacgaggcccactag
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