Rhizobium tumorigenes: PR017_17600
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Entry
PR017_17600 CDS
T08990
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtu03032
]
PR017_17600
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_17600
Enzymes [BR:
rtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PR017_17600
DNA replication proteins [BR:
rtu03032
]
Prokaryotic type
DNA Topoisomerases
PR017_17600
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PR017_17600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WFR95548
UniProt:
A0AAF1K491
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All DBs
Position
3633702..3634736
Genome browser
AA seq
344 aa
AA seq
DB search
MSEISITDLGLVYVNDSEPGIRRHRRGTGFSYKLPDGSVLNDAVHRKRIASLGLPPAYDN
VWICLQENGHLQATGMDARGRKQYRYHKEWQSHRSVEKFHQLIEFGQALPKMRRAVLRHL
DGGMDDIHGVLAALATLLDEAHLRVGNQSYARENGTYGATTLLKRHLKLNGGRIELRFIA
KGGKRVQRSLKHPRLQRMLEEIADLPGRQLFAWKDEHGLLRPVDSGRLNLYLGEISGLSV
SAKTFRTWGGSLAAFTSARNALEKGIRPTVKEMSEASAEVLHNTPAISRSSYIHPSIIAL
ADKQHSLDEEVFAPLVEPLRGLRADENRLLDFLIRRSEQSSPSA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatatcgatcacagatcttggtcttgtgtatgtgaacgacagcgaacctggt
attcgccgccatcgaagaggcacaggcttttcctacaagctaccggacggcagcgtgctc
aacgacgcggtccatcgcaagcggatcgcgtcgctcggtcttccgcccgcctatgacaat
gtctggatctgcctgcaggaaaacggccacctgcaggcaaccggcatggacgcgcgcgga
cgcaagcaataccgctatcacaaggagtggcagtcgcaccggagcgtggagaaattccac
cagcttatcgagttcggtcaggcgttgccgaaaatgcgccgcgccgttctgcgtcacctc
gatggtggtatggatgacatccatggcgtcctggccgcgttggccacgttgctggacgag
gcgcacctgcgcgttggcaaccagagctatgcgcgcgaaaacggtacctatggcgccacc
accctgctgaaacgccatcttaaactcaatggcgggcgtatcgagcttcggttcatcgcc
aagggtggcaagagggtgcagcggagcctgaaacatccgcgtctgcaaaggatgctggaa
gagattgccgatcttcccggtcgccagctgtttgcctggaaagacgaacacggattgctg
cggccggtggattcgggccgcctcaatctctacctcggggaaatctccggcctttcagtc
tcggcaaagacgtttcgaacctggggcggctcgctcgccgccttcacttccgcccgcaac
gcgctggaaaaaggcatacggccgacggtcaaggaaatgtccgaagcatcggccgaggtg
cttcacaacacgccggcaatttcgcgttcgagctacatacatccttcgatcattgcgctt
gcagacaagcagcattccctcgacgaagaggtctttgcgcccctcgtcgaaccgctgcgc
ggtcttcgggctgacgaaaaccgattgctcgattttctgatcaggcgcagtgaacagagc
agtccatctgcatag
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