Rhizobium tumorigenes: PR017_21030
Help
Entry
PR017_21030 CDS
T08990
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00521
Streptomycin biosynthesis
rtu00523
Polyketide sugar unit biosynthesis
rtu00541
Biosynthesis of various nucleotide sugars
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu01250
Biosynthesis of nucleotide sugars
Module
rtu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PR017_21030 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PR017_21030 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PR017_21030 (rfbC)
Enzymes [BR:
rtu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PR017_21030 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WFR98147
UniProt:
A0AAF1KH70
LinkDB
All DBs
Position
pRt1078:708598..709164
Genome browser
AA seq
188 aa
AA seq
DB search
MKIDRLPLAGLTKITPNRLGDHRGYFSETFKEGWFRENVADVTFVQENESLSASVGTVRG
LHFQLEPLAQGKLVRCIAGRIFDVAVDIRVGSATYGQWYGLELSKENGEQLWIPAGFAHG
FATLVPDCVISYKVTAPYSAENDRGLLWNDPSIGIAWPLPLQDAILSNKDKEQPTLAELP
AYFQMINE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaccgattgccgcttgctggcctgacaaaaattacccctaacagacttggt
gatcatcgcgggtacttttccgagacgtttaaggagggttggttccgcgagaatgtggca
gacgtcacatttgtacaggaaaacgagtctctctcggcttctgtcggaacggtgcgtggg
ttgcacttccagctggagccattggcgcaaggtaaattggtgcggtgtatcgcaggaagg
atcttcgatgtcgccgtcgatatccgcgtgggatcggcgacctacggacaatggtacggg
ctcgaactctcaaaggaaaacggcgagcagctctggatcccggcaggatttgcccacggc
tttgcgaccctggttcccgactgcgtgatctcatacaaggtgacagcgccctacagcgcg
gagaacgatcgcggccttctgtggaacgatccaagcatcggtatcgcgtggcccctgccg
ctccaagacgccatcctgtccaacaaggacaaggaacagccaactttggcggagcttccc
gcatactttcagatgatcaacgaataa
DBGET
integrated database retrieval system
