KEGG   Rhizobium tumorigenes: PR017_21035
Entry
PR017_21035       CDS       T08990                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
rtu  Rhizobium tumorigenes
Pathway
rtu00521  Streptomycin biosynthesis
rtu00523  Polyketide sugar unit biosynthesis
rtu00525  Acarbose and validamycin biosynthesis
rtu00541  Biosynthesis of various nucleotide sugars
rtu01100  Metabolic pathways
rtu01110  Biosynthesis of secondary metabolites
rtu01250  Biosynthesis of nucleotide sugars
Module
rtu_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    PR017_21035 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PR017_21035 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    PR017_21035 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PR017_21035 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    PR017_21035 (rfbB)
Enzymes [BR:rtu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     PR017_21035 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short KR
Other DBs
NCBI-ProteinID: WFR97673
UniProt: A0AAF1KSL0
LinkDB
Position
pRt1078:709185..710234
AA seq 349 aa
MRILVTGGAGFIGSALVRHLVKDVGAEVLNVDKLTYAGNLASLRDVDGAQNYRFLRADIC
DLQKMSEAMASFQPDRIMHLAAESHVDRSISGAADFVQTNVIGTFSLLEAARHYWNDLPA
DRKASFRFLHVSTDEVYGSLGEEGLFEEITPYDPSSPYSASKAASDHLAVAWHHTYGLPV
VVSNCSNNYGPYHFPEKLIPLIILNAMDGKPLPVYGKGVNIRDWLYVEDHARALDLIAGR
GRLGEKYNVGGRNERRNIDVVTRVCELMDQLRPKARPHAELITYVTDRPGHDARYAIDAT
KLERELGWKAQENFDSGIERTVRWYLDNEWWWQPLRQGVYSGERLGVLK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcgcattcttgtcacaggcggagcagggtttatcggttcggcactcgtccgtcatctc
gtgaaagacgtcggtgccgaggtcttgaacgtcgacaaactgacctacgccggcaatctt
gcatcgctcagggatgtcgatggcgcccagaactacaggttccttcgggccgatatctgc
gacctgcagaagatgtcggaggccatggcctccttccagccagatcgtatcatgcatctg
gccgccgaaagccatgtcgatcgttcgatcagcggcgccgctgacttcgtgcagaccaat
gtcatagggaccttcagccttctggaagcggcacggcattattggaacgaccttccggcc
gaccgtaaagcgtccttccgtttcctccatgtttcgaccgatgaggtctacggctcgctc
ggggaagaaggcttgttcgaagagatcacgccttacgatccatcctcaccctattccgct
tcgaaggcagcaagcgaccacttggcggtcgcatggcaccacacctatggcctgcccgtt
gtggtgtcaaactgctccaacaattacggtccctatcactttccggaaaagctgatcccg
ctcatcatcctcaatgccatggatggcaagccgctcccggtctatggaaagggcgtcaat
attcgcgactggctttatgtcgaggaccacgcgcgcgccctcgatttgatcgcagggcgt
ggccggttgggcgagaagtataacgtcggcggtcgcaacgagcgccgcaacatcgacgtc
gtcacccgcgtctgcgaactgatggaccagctgcgtcccaaggcaaggcctcatgccgag
ctgatcacgtatgttaccgaccgccccggccatgacgcgcgctacgccatcgacgccacc
aagctggagagagagttgggttggaaagcgcaagagaatttcgacagcggtattgagcgc
accgtgcgctggtatctcgacaatgaatggtggtggcagccgctgcgtcagggtgtttat
tctggcgagcgtctcggcgtactgaaatag

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