Rhizobium tumorigenes: PR017_21035
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Entry
PR017_21035 CDS
T08990
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00521
Streptomycin biosynthesis
rtu00523
Polyketide sugar unit biosynthesis
rtu00525
Acarbose and validamycin biosynthesis
rtu00541
Biosynthesis of various nucleotide sugars
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu01250
Biosynthesis of nucleotide sugars
Module
rtu_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PR017_21035 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PR017_21035 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PR017_21035 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PR017_21035 (rfbB)
00525 Acarbose and validamycin biosynthesis
PR017_21035 (rfbB)
Enzymes [BR:
rtu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PR017_21035 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
WFR97673
UniProt:
A0AAF1KSL0
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Position
pRt1078:709185..710234
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AA seq
349 aa
AA seq
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MRILVTGGAGFIGSALVRHLVKDVGAEVLNVDKLTYAGNLASLRDVDGAQNYRFLRADIC
DLQKMSEAMASFQPDRIMHLAAESHVDRSISGAADFVQTNVIGTFSLLEAARHYWNDLPA
DRKASFRFLHVSTDEVYGSLGEEGLFEEITPYDPSSPYSASKAASDHLAVAWHHTYGLPV
VVSNCSNNYGPYHFPEKLIPLIILNAMDGKPLPVYGKGVNIRDWLYVEDHARALDLIAGR
GRLGEKYNVGGRNERRNIDVVTRVCELMDQLRPKARPHAELITYVTDRPGHDARYAIDAT
KLERELGWKAQENFDSGIERTVRWYLDNEWWWQPLRQGVYSGERLGVLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttgtcacaggcggagcagggtttatcggttcggcactcgtccgtcatctc
gtgaaagacgtcggtgccgaggtcttgaacgtcgacaaactgacctacgccggcaatctt
gcatcgctcagggatgtcgatggcgcccagaactacaggttccttcgggccgatatctgc
gacctgcagaagatgtcggaggccatggcctccttccagccagatcgtatcatgcatctg
gccgccgaaagccatgtcgatcgttcgatcagcggcgccgctgacttcgtgcagaccaat
gtcatagggaccttcagccttctggaagcggcacggcattattggaacgaccttccggcc
gaccgtaaagcgtccttccgtttcctccatgtttcgaccgatgaggtctacggctcgctc
ggggaagaaggcttgttcgaagagatcacgccttacgatccatcctcaccctattccgct
tcgaaggcagcaagcgaccacttggcggtcgcatggcaccacacctatggcctgcccgtt
gtggtgtcaaactgctccaacaattacggtccctatcactttccggaaaagctgatcccg
ctcatcatcctcaatgccatggatggcaagccgctcccggtctatggaaagggcgtcaat
attcgcgactggctttatgtcgaggaccacgcgcgcgccctcgatttgatcgcagggcgt
ggccggttgggcgagaagtataacgtcggcggtcgcaacgagcgccgcaacatcgacgtc
gtcacccgcgtctgcgaactgatggaccagctgcgtcccaaggcaaggcctcatgccgag
ctgatcacgtatgttaccgaccgccccggccatgacgcgcgctacgccatcgacgccacc
aagctggagagagagttgggttggaaagcgcaagagaatttcgacagcggtattgagcgc
accgtgcgctggtatctcgacaatgaatggtggtggcagccgctgcgtcagggtgtttat
tctggcgagcgtctcggcgtactgaaatag
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