Rhizobium tumorigenes: PR017_21570
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Entry
PR017_21570 CDS
T08990
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PR017_21570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtu02000
]
PR017_21570
02044 Secretion system [BR:
rtu02044
]
PR017_21570
Transporters [BR:
rtu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PR017_21570
Secretion system [BR:
rtu02044
]
Type I secretion system
Multiple protein transporter
PR017_21570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
nSTAND1
SMC_N
AAA_16
AAA_21
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_30
Dynamin_N
AAA
AAA_33
DUF815
MMR_HSR1
NACHT
FtsK_SpoIIIE
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
WFR97757
UniProt:
A0AAF1KFW3
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All DBs
Position
pRt1078:complement(822839..824605)
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AA seq
588 aa
AA seq
DB search
MVAITEYISDVEGVLMKIDNPFVAALRSYRQILSSIIVFSVAINALMFVSPLYMLQVYDR
VLHSRSETTLLMITSLALVLLAIYSLLEWLRSRILVRAGLRFDDMISNGLFSRVVTTTLR
QPQARSEFALSDIDRLRDFLTGPGLIAICDLPWMPVFLIVCFLFHPLVGVISLVGALLIF
GLAILNEFMTKRTLNEASGHAQAAQQFASSALQNVEVVRALGMEHSLRSRWHDMHRTMLV
KQVIASDRGGALQSLSKFIRMALQTIILGAGAYLSIEGEISGGSMIACSILMGRALQPID
QVVGQWKQFVGARQAYSRLSQIFSDVPVEQIRTQLPAPHGRLVVDQLTVVAPGQRMAVLQ
GISFHVQPGQAVAVVGSSGSGKSSLVRALVGVWPAHSGAVRLDGSELQHWQKDDLGRHLG
YLPQSVELFAGTIAENISRFQSDALPEQIIAAATAARVHSMIQSLPNGYDTQIGPGGSSL
SGGQRQRIGLSRALFGNPAVIILDEPNANLDSDGEEALFQVIGELKAAMKGVIFVSHKMS
LVALAEKTLVLANGRAQSFGATRDIFQPKAMQAPERAFGSAPQPRHVA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgatcaccgagtatatttctgatgtcgaaggtgtccttatgaaaatcgataat
cctttcgtcgccgctttgaggagctatcggcaaatattatcatcaataattgttttcagc
gtcgccatcaatgcgcttatgtttgtgtcgcctttgtatatgctgcaggtttatgaccgc
gtgctccatagccgcagtgaaacaactttgctaatgattacaagccttgccctagtgctg
ttggccatctacagtctactggaatggcttcgatctcgcattctagtccgcgcgggcctt
cgcttcgatgatatgatttcaaacggcctatttagccgcgttgtcacaacgacgctacgg
caacctcaggcacgatcggagtttgccctttcggacattgatcgacttcgggattttttg
accggccccggcctgattgctatttgcgatcttccttggatgcccgtgtttttgatcgtc
tgctttctcttccatccacttgtcggcgtgatctcactggtgggagccctgctgatcttc
ggccttgccattctcaacgaattcatgacgaagaggacgttgaatgaggccagcggtcat
gcccaagcagctcagcaattcgctagttctgcacttcaaaacgtcgaggtcgttcgcgca
cttggcatggagcatagtcttcgttctcgatggcatgacatgcaccgcaccatgctcgtc
aagcaagtgattgcgagtgataggggaggcgcactgcagtcgctttcaaagttcattcga
atggcattgcagacgataatactaggtgctggggcttatctctcaatagaaggggagatc
tcggggggatctatgatcgcttgctcgatcttgatgggccgcgcgctgcagccaattgac
caagtcgttggccaatggaagcagtttgtcggagcacgacaagcctacagtaggctgtct
caaattttcagcgatgtcccggttgaacagatcagaacgcaattgccagcaccacatggc
agattggtggtggatcaactgacagttgtggctccagggcagcggatggctgttttgcag
ggtataagtttccatgtgcagcccggtcaggcggttgccgtcgtgggatctagtggttcc
ggcaaatcgagtttggtccgggcgttggttggcgtgtggccagcgcattcgggtgcggta
aggcttgatggatcggagttgcagcattggcagaaagatgatctcggcaggcaccttggt
tatcttccccaatcggtcgaactgttcgctggtaccatcgctgaaaatatttcgcgtttt
cagtccgatgccttgccagagcagattatcgctgcggccactgcggcccgggtccattcg
atgatacagagtctgcccaatggctatgatacacagattggtccgggtggtagttcgcta
tctggcggacaacgccagcggattggactatctcgagcgctttttggcaatccagctgtg
attatcctagatgaaccgaatgccaatctcgacagcgatggagaagaagcactttttcaa
gtcatcggtgaactgaaggccgcaatgaaaggtgtaatcttcgtcagtcacaagatgagc
ctagtggcgctggcagaaaagacgcttgtgctcgcaaatggtcgcgcccaatcctttggt
gcgacgcgagatatttttcagcccaaggcgatgcaggccccggagcgtgcatttggtagc
gcaccgcaaccccgccacgtcgcctga
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