Rhizobium tumorigenes: PR017_22235
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Entry
PR017_22235 CDS
T08990
Symbol
istA
Name
(GenBank) IS21 family transposase
Organism
rtu
Rhizobium tumorigenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
Sigma70_r4_2
Sigma70_r4
HTH_24
MarR_2
HTH_5
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WFR98480
UniProt:
A0AAF1KA20
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Position
pTi1078:complement(154697..156250)
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AA seq
517 aa
AA seq
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MPRRKQARHTDVKDIRSILRLTFEQELSIRAVSERLKMSKTSVSTYLLRAREAGLAAWPL
PPGLDDDELLEQRLFRRMGRPPRDSEEPNWPKVASELKRKGVTLNLLWQEYREVHPDGYG
YTWFCCRFADYESRAKPTYRSRHVAGVAMECDYAGHTIPIIDPSSGEIRAAQIYVAVLSA
SQLVFSYASFSQKLPDWIEANQRAFSYFGGVTKTTICDNLKSAIAKALWFEPTLNATFAA
FAEHYDTTVLPARPRRPRDKPSAEGSVLIVERWVLARLRNDRFFSLVDLNIRISALIEDL
NTRTMRRYGKSRRALFDEVERSQLKPLPPTPFEYAEWKVAKVHPDYHVDVDKTFYSVPHG
LIGRKVDIRLTYRAVEIFFDHKRVASHIRSSQRSGHITVNEHMPKAHQRYANTTPHTLRK
EAAKVGANTAIFIERLLSDRPHPEQGYRSAQGILSLARRYETDRLELACERALVINALTY
SSVANILRSGLDQAPAASETVKPAPPHGNIRGKTYYQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcctagacggaagcaagcgagacatactgatgtgaaagacattcgatcgatactgcgg
ctgacgttcgagcaggaattgtcgatacgcgccgtttctgagcggctgaagatgagcaag
acgtcggtctcaacgtatctgctgcgggcgcgggaggcggggcttgcagcatggccactt
ccacccggtctggatgatgacgagctcctggagcagcgactattccggcggatggggcga
cctcctcgagacagcgaggaaccgaactggccgaaagtggccagcgagttgaaacgcaaa
ggcgtgacgctcaacctgctatggcaggaataccgggaggtccatccggatggatacggc
tacacctggttctgctgccgatttgctgattatgagagccgcgccaaacccacctatcgc
agtcgtcatgtggctggtgtcgcgatggaatgcgactatgccggccatacgatcccgatc
atcgatccgtcttctggcgagatccgggcagcacagatttatgtggccgtgctgagtgca
tcgcaattggtgttctcctatgccagcttcagtcagaagctgccggattggatcgaggcg
aaccagcgagccttcagttacttcggtggggtgacgaagacgacgatctgcgacaacctc
aaatccgcgattgccaaggctctctggttcgaaccgacgttgaacgcgacatttgctgcc
ttcgccgaacactacgatacgaccgtattgccagcacggccgcggcgtcctcgggataaa
ccatccgcggagggatcggttttaatcgtcgagaggtgggttctggccagacttcgaaac
gaccgtttcttcagccttgtcgatctcaatatccgcatcagcgctctgatcgaggacctt
aacacccgtacgatgcgtcggtatggaaaatcccggcgagccctgttcgatgaggtcgag
cgctcccagctcaagccactgccgccaacgccgtttgaatacgcggaatggaaggtcgcc
aaggttcatcccgattaccatgtcgacgtcgacaagacgttctattccgtgccgcacggt
ctgatcggcaggaaggtcgatatcaggctgacgtatcgagcggtcgagatcttctttgac
cacaagcgggtcgccagccacatccgaagctcccagcgttccggccatatcactgtcaat
gagcatatgccgaaagctcaccagcgctatgcaaacacgacgcctcacacgttgcgcaag
gaagcggcgaaggttggggccaatactgcgatatttatcgagcgtctgcttagcgatcgg
ccgcacccggagcaaggctacagatccgctcagggcattctctccctggcgcgtcgttac
gaaaccgatcggctggaattggcctgtgagcgtgcgttggtcatcaatgcgctgacctat
tcgtctgtcgccaacattctcagatctggtctcgatcaggctcctgccgcaagcgagacc
gtgaagccggcaccgccgcacggcaatatccgcggcaaaacctactaccaatga
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