KEGG   Rhizobium tumorigenes: PR017_23875
Entry
PR017_23875       CDS       T08990                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
rtu  Rhizobium tumorigenes
Pathway
rtu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PR017_23875 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rtu02044]
    PR017_23875 (tssM)
Secretion system [BR:rtu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PR017_23875 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C Connexin IcmF_helical DUF4381
Other DBs
NCBI-ProteinID: WFR98740
UniProt: A0AAF1KUS2
LinkDB
Position
unnamed1:complement(49218..52700)
AA seq 1160 aa
MNNPLSLFYTLRSYVEAYAGLIGRRFITVIWVAAVCVVIWFYGSLAAYGDFKPLATPNAR
ITLIVVVIVAWLIYLGYSTYRDRRRDKQLVEGIEQDAAAEAAASQNAEVSEIHNRLKEAL
QLLRRITKKRFGYIYELPWYVIFGAPGSGKTTALSNSGLKFPLGDALGSNSVQGIGGTRN
CNWWFTDEAILIDTAGRYTTQDDLNGTAKAGWEGFLGLLRKYRRSQPINGALLTLSIGDL
LTRDAEAQREEIRVIRQRLSELDEQLQARVPVYLVLTKADLLTGFVEFFDGLNKSDREQV
WGTTFGLDESYKAETLPELYLAEFTLLQERVGSMLIERLQQEPNPELRGRIFRFPAELAA
LKERLHDVMAELCSGSKLIEPPLLRGVYFASGTQAGPSVAAASQSRRSYFLSRLFKDVIF
EEASLVSRDKRLSRRQVFFRRAAYASAILVLAVVLTSWTATYFQNTAAIASADRRIDAYE
QSIRGVRVRDVSDADFLRILPAFDNLAAVTTDFSKTRVWPVSFGLDQEGKVAARQRDAYQ
RALNALLLPRMLVQLQKQMTETTDVAATFNALKLYGMLGGLGKIEPDFVSLEAEDMFTAL
YPGEGRATARHALIAHAKAMADGVLPPIELDDTLIAKARDTIRPQSLASRTYDILANERS
SRDLPAWTPASALGAFGEQAFERASKTPLQDGIPGIFSTTGYRTVVLPDITDAAREALDE
SWVRGEANPAGTTIDTTAQAALQLYFNSFEQRWTALLSDMRVKPSQTIGDAAETTRILAS
EPSPVEGLAKSIVATTDLRAPGTDVASTGDADPVSATNALTAAADAPDPFGGLRAALEVP
AGQTPISDQAKDAPKSPIGQLKPLLQKVHDQLSRATTSTAEVAKVFDVDSQLTDANQDLL
QQARRLPPPVDTWMAGLAADVGSLAVKSARTRISDSWTAEGASFCSSVIAGRYPFDRQSP
RDVAMSDFIRLFGPKGLFKTFFSEKLAAFVDTSSTPWGWKGTFGAKSIPSEAVAQFENAD
KINRAFFPAGSENPAVAINIKPVSLSEGANAVMLEIEGERVVYFHGPVQSKSISWPSTSP
SSVSRLAFQPGGWEQALTENGDWSPFRLFDDAKIDNQGSDLFRASFSKSGQVAEFDVQFG
SVLNPFRLEALSAFSCPAQF
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgaacaatccgctgagccttttctatacgctgcgttcctacgtcgaagcctatgccggc
ctcatcggacggcgtttcattaccgtcatctgggtagcggcggtctgcgtcgtcatctgg
ttctacggctcgcttgccgcctatggcgacttcaagccattggccacgcccaacgcgcgg
atcacgctcatcgtcgtcgtcattgtcgcctggctgatctatctcggctattcgacctac
cgcgaccgccgtcgcgacaagcagcttgtagagggcattgagcaggatgcagcagcggaa
gcggctgccagccagaacgcggaagtcagcgagatccacaatcggctgaaggaagcactg
cagctcctgaggaggatcacgaagaagcgcttcggctatatctatgagcttccctggtac
gtgattttcggtgctcccggctccggcaagacgacggcactctcaaactccggtctgaaa
tttccgcttggggatgcgctcggcagcaactccgtccagggaatcggcggcacccgcaat
tgcaactggtggttcacggacgaagcgatcctgatcgatacggcaggtcgctacaccacg
caggacgatcttaacggtactgcaaaggcaggctgggaaggcttcctggggctgcttcgc
aaataccgccgctcgcagccgatcaacggcgccctgctgacgctttcgatcggcgacctc
ctgacccgcgatgcagaagcacaacgcgaggaaatccgcgtcatccgccagcgcctttca
gaactcgacgagcagctgcaggcgcgcgtcccggtctatctggtcctgaccaaggccgac
cttctgaccggcttcgtcgaattcttcgacggcctcaacaagtcggaccgcgagcaggtc
tgggggacgacgttcgggctcgacgagagctacaaggccgagacccttcccgagctttat
ctcgcggaattcacattgctgcaggaacgggtcggctcgatgctgatcgagcgcctgcaa
caggagcccaaccccgaactgcgcggccgcatcttccgctttcctgccgaactcgctgca
ctgaaggaacgccttcacgacgtgatggccgagctttgctccggctccaagctcatcgag
ccccccttgttgcggggcgtctatttcgcctcgggcacgcaggctggcccttctgtcgcc
gcagcctcccagtcgcgtcgcagctatttcctgtcgcggcttttcaaggacgtcatcttc
gaggaagcctcgctcgtatcccgcgacaagcggttgtcgcgtcgccaggtgttcttccgc
cgggcggcctacgcatccgccattctggttctcgccgtggtgttgaccagctggactgca
acctacttccagaataccgcggcaattgccagcgccgaccgccgtatcgatgcctacgag
cagtccattcgcggcgtgcgcgtgcgtgatgtgtcggatgccgatttcctccgtattctg
ccggccttcgacaaccttgcagctgtgaccaccgatttctcgaaaacgcgcgtttggccc
gtcagcttcgggctcgaccaggagggcaaggtcgcggcccggcagcgcgacgcctaccag
agggcgctgaacgcccttctcctgccgcgcatgctggtgcaattgcaaaagcagatgacg
gagaccacggacgtggcggcgaccttcaacgccctcaagctctatggtatgctcggcggc
cttggaaaaatcgagcctgattttgtgagcctcgaagccgaagacatgttcaccgccctt
taccccggcgaagggcgtgccacagcccgccacgcgctgattgcccatgcaaaggcgatg
gcggacggtgtcctgccacctatcgagctggacgataccctgatcgccaaggcgcgcgat
accatccgcccgcaaagccttgcgagccgaacctacgatattctggcaaacgagcgctcc
tcccgcgatttgccggcgtggacccccgcaagcgcgcttggcgcgtttggcgaacaggcg
ttcgaacgtgcatcgaagacgccgctgcaggatggcattccgggcatcttctcaacgacc
ggttatcgcacggtcgtgctgcctgacatcaccgatgcagcccgagaggcgctcgacgag
agctgggtgcgcggtgaggccaatccggccggaaccaccatcgatacgacggcgcaggca
gcactccagctttatttcaacagcttcgaacagcgctggacggcgctgctgagcgacatg
cgggtcaagccttcccagacgatcggcgacgccgcggaaacgacccggatccttgcaagc
gaacccagccccgtcgagggcttggcgaaatccatcgttgcgaccaccgatcttcgagcc
cccggcaccgatgtggcctccaccggtgacgcagacccggttagtgcgacgaatgcactg
accgcagcagccgatgcgccggatcccttcggtggcctgcgtgccgcgctcgaagtgccg
gccgggcagacgccgatctcggaccaggccaaggatgccccgaaatcgcctataggccag
ctaaaaccgctgctgcagaaagtccatgaccagttgtccagggctaccacctcgacggcc
gaagtcgccaaggtattcgacgtcgacagccagcttaccgacgccaaccaggacctcctg
cagcaggcacggcgcctgccaccgccggtcgatacctggatggcaggactggcggcggat
gtcggctctctggcggtcaaatccgcccgcacacggatcagcgactcctggacggcagaa
ggtgctagcttctgctccagcgtcattgccggcagatacccgtttgacaggcaatcgccc
cgagacgtggcgatgagcgatttcatccggctgttcgggccgaaaggcctgttcaagacg
ttcttcagcgaaaagctggctgcctttgtcgataccagttccaccccctggggctggaag
ggtacgttcggcgcgaagagcatcccgagcgaggcagtcgcccagttcgagaatgccgac
aagatcaaccgcgcctttttcccggcgggaagcgagaacccggctgtcgcgatcaacatc
aagcccgtctcgctgtctgagggcgccaacgcagtgatgctcgagatcgagggagaacgt
gttgtatatttccacgggcccgtacaatcgaaatcgatttcctggccatcgacatcgcca
agcagcgtctcccgcctcgccttccagcccggcggctgggagcaggcgctgacggaaaac
ggcgactggtcgcctttccgcctcttcgacgatgccaagatcgacaaccagggcagcgat
ctcttccgggcatccttcagcaaaagcggccaggtcgcggaattcgacgtgcagttcggc
tcggtcctcaatcccttccggctggaagcgctttcggcgttttcctgcccggcacaattc
tga

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