KEGG   Rhizobium tumorigenes: PR017_23920
Entry
PR017_23920       CDS       T08990                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rtu  Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rtu02044]
    PR017_23920 (tssC)
Secretion system [BR:rtu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PR017_23920 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 CIDR1_gamma
Other DBs
NCBI-ProteinID: WFR98749
UniProt: A0AAF1KC78
LinkDB
Position
unnamed1:complement(62512..63993)
AA seq 493 aa
MSTETQLQTPQQADAVADGDLLAKVVAATRQTEPDRAQDLLRTLTDQALAGTVTYDRNLT
ITLNNAIAELDKTISAQLAAIMQAPEFVKLEGTWRGLQYLVKNSETSVNLKIRVLNASKR
EVSKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDYEFDNSFDDVQLLQGISSIA
AAAFAPFISAASPRMFGFDDFRELAKPRDLEKIFETVEYAKWRGMRDSEDSRFVTLAMPR
VLARMPYGPQTSRIDEFNYDETGGSKNGELPHENYCWMNAAYVMGTRLTEAFAKSGWCTA
IRGAENGGKVEGLPMHVFASDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
VFFGAQTTHKPKLYDRPEATANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAKDCE
AWLNRWISNYVNANDEAGEESRAKYPLRDAKVTVQEIPGKPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcactgaaacgcaattgcagaccccgcagcaggccgatgctgtcgccgatggcgat
ctgctcgccaaggtcgttgcggccacccgccagacagagccggatcgcgcccaggatctg
ttgcgtaccctgacggaccaggcccttgccggcacagtcacctatgaccgtaatctgacg
atcacgctgaacaacgccatcgctgaactcgacaagacaatttcggcccagctggctgcg
atcatgcaggcgcccgaattcgtcaagctggaaggcacatggcgcgggctgcagtatctc
gtcaagaacagcgagaccagcgtcaacctgaagatccgcgtgctgaacgcttcgaagcgt
gaagtcagcaaggatctggccaaggcggtcgagttcgatcagtcacggctgttcaaatcg
gtctacgaagacgagttcggcacacccggcggcgagccgatgggcgccctgatcggcgat
tacgagttcgacaattcattcgacgacgtacagctcctgcagggcatctcgtccatcgcg
gcggcagcgttcgcgccgttcatctcggcggccagcccgcgtatgttcgggttcgacgac
ttccgcgaacttgctaagccacgcgatctcgagaaaatcttcgaaactgtcgaatacgcc
aaatggcgggggatgcgcgatagcgaggacagccgtttcgtcacgctggccatgccacgc
gtcctggcgcgcatgccctatggaccgcaaaccagcaggatcgacgagttcaactacgac
gaaaccggcggctccaagaatggcgaactaccgcacgagaactactgctggatgaacgct
gcctatgtgatgggcacgcggttgacggaagcctttgccaagagcggctggtgcaccgcc
attcgtggtgcggaaaatggcggcaaggttgaaggtctgccgatgcatgtgtttgccagc
gacgacggcgacctcgatctcaaatgcccgacggaagtcggaattactgaccgccgcgat
gcggaactcggcaagctcggcttcctgccgctctgccactacaagaacaccgactatgcc
gtgttcttcggtgcgcagacgacgcacaagccaaagctctacgaccgcccggaagcgaca
gcgaacgcagccgtttcggcccgcctgccctacatgatggccacgtctcgctttgcccat
tacctgaaggtcatgggacgagacaagatcggctcgttcatggaggccaaggattgcgag
gcctggctgaaccgttggatttccaactacgtcaacgccaatgacgaagccggtgaagag
tcccgcgcgaaatacccgttgcgcgacgccaaggtcaccgtccaggaaattcccggcaag
ccgggcgcttacaatgccgtcgcctggatgcggccatggttgcagatggaggaactgacg
acctcgctcagaatggtcgcgcgcattccgtccaagtcctga

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