KEGG   Rhizobium tumorigenes: PR017_23960
Entry
PR017_23960       CDS       T08990                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
rtu  Rhizobium tumorigenes
Pathway
rtu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PR017_23960 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rtu02044]
    PR017_23960 (tssI)
Secretion system [BR:rtu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PR017_23960 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: WFR98757
UniProt: A0AAF1KT29
LinkDB
Position
unnamed1:71684..73849
AA seq 721 aa
MDDMSSAADFIQANRILKIVSPLGEDQLLPERAVIHEGISALFEIRISARSKKEQVKPED
LIGRLMDVSVEVEQGDGEEGSAVRRPFNGLVTELNEGPPITRGLRAYSIVLRPQMWLLSQ
RSDCRIWMDKTSVDIVDTLFSEHGIPAPDTSGIVSPPPPQHYSVQWNETDLAYLTRRFEE
DGLFYWFSHEDGKHRLHVADSASGWLGPSPSARGETKVRLAQGSSDRNHINDWARRFSYV
PGQRAGADWNFETPRMVPGTMTPSLVQMPDAIKRELYEYPARISSVAEAERAEKLRMQAS
EADHDRVFGASTSRILEAGRRFTPYEVAHPDHGYEEHVIVRAVYEVVDRSYETNTNEPEY
TNRFEAIPSRVPMTPHRETKRPRIEGAQVAIVAGPEGEEIHPDQYGRIKVWFPWDRRAKK
DGSDTTWVRVAQSWAGSTWGGQIIPRIGMEVMVAFVDGDPDRPLVTGVVPNPANGVPYTL
PANKTKSTFRTNTHKGIGFNELSFEDENGREEVYMHAQRDHRIHVENSRSKRIDNNQAES
IGHNKTIEVGNNHHEVIGGNMTLMVGPNILQKGVTAAMGVLRSNIGDLLTSKLGAFTDKL
GILADATMGEGNLVIGVAKNKAETVMVSSTEIVGAAKSMTIGGGLQTTVGGIRNDSTAIG
HYQEVGMAKSTVVGKTYEIVVGKTSVRMEADGTIHVKGENVTIEAAQELVLKASKVDIRR
N
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggacgacatgtcatcagccgccgatttcatccaggcaaaccgtatcctgaagatcgta
tcgccgctcggcgaagaccagcttctgcctgagcgcgcggttatccacgaaggcatatcg
gcgctgttcgagatccgtatatcggcgcgctcgaagaaggagcaggtcaagccggaggat
ctgatcggccgactgatggatgtttccgtggaggtcgagcagggggacggggaggagggc
agtgcggtgcgccggcctttcaacggccttgttaccgaactcaacgaggggccgccgatc
acccgcggcctgcgtgcctattcgatcgtacttcggccgcagatgtggcttctgtcgcaa
cgctccgactgccgcatctggatggacaagacgtcggtcgacatcgtcgacacgctgttt
tccgagcacggcattcccgcccccgatacctcagggattgtttctccgccaccaccccag
cattattcggttcagtggaacgagaccgatctggcttatcttacaaggcgtttcgaggag
gacgggctgttctactggttctcccacgaggacggcaagcaccggctgcatgtggccgac
agcgcctccggatggcttggcccgtcaccgtcggcgaggggcgagacgaaggtacgcctc
gcccagggctcgtcggatcgcaaccacatcaacgactgggcacgccgcttctcctatgtg
ccgggccagcgcgccggggccgactggaatttcgagacgccgcgcatggtgccgggcacg
atgacgccgtcgctggtgcagatgccggatgcgatcaagcgcgagctttacgaatacccg
gcccgcatctcctcggtggccgaggcagagcgcgccgagaagctgcggatgcaggcctcg
gaggccgaccacgaccgggtcttcggcgcctcgacctcgcgcatcctcgaagccggccgc
cggtttaccccttacgaagtcgcccatcccgaccatggctacgaggaacacgtgatcgtc
cgggcggtctacgaggtcgtcgaccgttcctacgagaccaataccaacgagcccgaatat
actaaccgcttcgaggcaatcccgtcacgcgtaccgatgacgccgcaccgcgagaccaag
cggccacgcatcgagggcgcccaggtggcgatcgtggcgggtccagagggcgaggagatc
catcccgaccagtacggccgcatcaaggtgtggttcccttgggatcgccgggcaaagaag
gacggctcggacaccacatgggtgcgcgtcgcccaatcctgggccggctccacctggggc
ggccagatcatcccgcgcatcggcatggaagtcatggtggctttcgtggatggcgatccg
gatcgtccgctggtgacgggggtggtgcccaatccggcgaatggggtgccctataccctc
ccggccaataaaacgaagagcacattcaggacgaacacgcacaaaggcatcggttttaac
gagctttccttcgaggacgaaaatggccgcgaggaagtttacatgcatgcccagcgggat
caccgcattcacgtggaaaattcgcgttcgaaacggatcgacaacaatcaggcggaatcg
atcggccacaacaagacgatcgaggttggaaacaaccatcacgaagtgattggcggcaac
atgacgctgatggtcgggcccaacatcctgcaaaagggagtgacggcggccatgggcgtg
ctgcgcagcaatattggcgacctgctgacgagcaagctcggagcctttaccgacaaactg
ggtattctggcagacgccacaatgggcgaaggcaacctcgttatcggcgttgccaaaaat
aaggccgaaactgttatggtctcttcgaccgagattgtcggcgctgcaaagtcgatgacg
atcggcggcggactgcagacaacggtcggcgggatccgcaacgactcgaccgcgatcggc
cactaccaggaagtgggcatggccaagtccacggtcgtgggcaagacctatgagattgtg
gtgggcaagaccagcgtcaggatggaggcggacggcacgatccacgtcaagggcgaaaac
gtgacgatcgaagcggctcaggaacttgtcctgaaagcttcgaaagtcgatatccgcagg
aattga

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