Rhizobium tumorigenes: PR017_25395
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Entry
PR017_25395 CDS
T08990
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR017_25395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtu02000
]
PR017_25395
Transporters [BR:
rtu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PR017_25395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
RAB3GAP2_N
PfkB
Endotoxin_C2
Motif
Other DBs
NCBI-ProteinID:
WFR98649
UniProt:
A0AAF1KX10
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All DBs
Position
unnamed1:complement(387853..388968)
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AA seq
371 aa
AA seq
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MNSFHINRRTLLQAGSAALGASLLNLGPLRAEAATTMPEALVAAAKKEGALNVVALSPNW
VFGKMMTDFSKLYGIEVNAANPEGSSAEELQAVRSLKGQDRGPDTLDLAPSFALQAVTDN
LLQPYKVATWNDIPSEVKNPDGLWQGCYYGIISFAVNKSVVKTVPRSWADLLKPEYKGMV
SMGGSPVRAGDSFAAVMAAALANGGSFDNIAPGVEFFGKLAAAGNYNPMQSDKGTMMSGQ
TPIALRWDYLNLTIRDDEAGKVDFEVVVPNDGAPFGNYYCEAISAYAPHPNAAKLWQEYL
YSDEGQLGFLAGYAHPIRFAKMLDAGVLPAALLAKLPSPEAYKSVRFASQAQIDAAKKVV
ADLWPKTVKTN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgtttcacatcaatcgcaggactttactgcaggcgggctcggcggcgctcggc
gcatcgctgctcaacctcggcccgctgcgtgccgaggctgcgaccaccatgccggaagct
ctcgtcgctgccgccaagaaagaaggcgcgctgaacgtcgtggccctgtcgccgaattgg
gtcttcggcaagatgatgaccgacttctccaagctctacgggatcgaggtgaatgccgcc
aacccggagggttcgtcggccgaagaactgcaggccgttcgcagcctgaagggccaggat
cgcggtccggacacgctcgatctggcgccgtccttcgcgctgcaggccgtcaccgacaac
ctgctgcagccctacaaggtcgcgacctggaacgatattccctcggaggtcaaaaacccc
gatggcctctggcagggctgctattacggcatcatctcattcgccgtgaacaagagcgtc
gtcaagaccgtgccgcgtagctgggctgacctcctgaagccggaatacaagggcatggtg
tcgatgggcggcagtcccgtgcgggccggcgattccttcgcagccgtgatggcggcagct
cttgcaaacggtggcagcttcgacaacatcgcacccggcgtggagttttttggcaagctt
gcagcagccggcaactacaatccgatgcagagcgacaagggtaccatgatgagcggccag
acgccgatagcgctgcgctgggactacctcaacctgacgattcgcgacgacgaggccggc
aaggtcgatttcgaagtcgtcgttcccaatgatggcgccccgttcggcaactattattgc
gaggcgatcagtgcctatgcgccgcacccgaacgccgccaagctgtggcaggaatatctg
tacagcgatgaaggacagctcggctttcttgccggctacgcccatccgatccgctttgcc
aagatgctcgacgccggcgtcctgcctgccgcgctgctggccaagttgccatctccggag
gcctacaagagtgtgcgttttgcaagccaggcgcagatcgatgccgcgaagaaggtagtc
gccgacctgtggcccaagaccgtcaagacaaactaa
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