Rhizobium tumorigenes: PR017_26845
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Entry
PR017_26845 CDS
T08990
Name
(GenBank) PAS domain-containing protein
Organism
rtu
Rhizobium tumorigenes
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
Response_reg
PAS_3
HATPase_c
PAS
PAS_9
GAF
HisKA
GAF_2
SPOB_a
DUF5610
Motif
Other DBs
NCBI-ProteinID:
WFR98998
UniProt:
A0AAF1K9V3
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Position
unnamed2:complement(260946..264461)
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AA seq
1171 aa
AA seq
DB search
MIYNDAYSAVAGKRHPALLGSKVREGWPEVAAFNDHVMRTCLSGKQLAYRDQEFVLHRNG
QPEQVWLNLDYSPLLDNDGKPVGVIAIVVETTGKVRAEQRLRGESDRLRKMFEQAPGFVA
TVSGPDHIFEIANKAYLDLIGNRDIFGKPVREALPEVVEQGFVDLLDHVFRSGQPFIGHS
ALILLKQRSGEQAERFIDFIYQPTFDEWGSVTGIFVQGNDVTDRRASEEALRESESRFRL
IADNAPVMLWMANATGQSVYFNARKRAFWNVAEAAVATFDWGATVHPDDRDALLAKLDRA
MRLQSRVTLEARYLDANANYRLIQTEAQPRYDVAGAFLGLIGVDTDITDTRLQEVYRSAL
ISLNDSLRDIGDPADIAFKAARILGQTMNVSRAGYGTIDPLRETITIERDWNAPGIETLA
GVLHFRDYGSYVEDLKRGETVVFSDATKDPRTCENAAELIAISAQSVVNMPISEQGGLVA
LLYLNHATAREWKPEELAFIREVAERTRTAVERRRAEQDLQQLASSLERQVAARTADLDR
VWRNSRDLLVIIGSDGLLHAVNPAWPAVLGHAKLEVIGRSFFDFVWPDDLRLTKRALQGA
ASVADLESFEARNRHKDGSPRWISWRISSQDGMIFAYGRDITSEREQAAALDRVEEQLRQ
AQKMEAIGQLTGGVAHDFNNLLQVVSGNLHLLSKEVADNARARARIENALAGVNRGAKLA
AQLLAFGRRQALEPKVMNIGRFVAGMGDMLGRTIGEAIEIETVQAGGLWNTFVDPAQIEN
AILNLAINARDAMDGRGKLTIEVGNAFIDEAYAHKHVEVDPGQYVMLAVTDTGSGIPADI
IEKVFEPFFSTKPLGKGTGLGLSMVYGFVKQSGGHIKIYSENGQGTTIRIYLPRSMQAED
RLTEMEFGPASGGTETILVAEDDEDVRATVVEMLGDLGYRVLKAVDAASALTIIESGLPI
DLLFTDVVMPGPLKSAELARKAKQRQPDMAVLFTSGYTENSIVHGGRLDAGVELLSKPYS
RDALARRIRQLLDQRQVDMAAAAEAAVTPLPVSAPSPRPLKLLVVEDDALIRLDTVEQLQ
EAGHDVVDASSAEEALVLVKSERFDILLTDLGLPGLSGGELAEKIRAIYPQMGIIFATGN
AEMPAVSTGPKPVLLQKPYNNRSLLRAVGSA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatctacaacgatgcctattcggcggtggctggaaaacgccatcctgcgctgttggga
tctaaggtgcgggagggctggccggaagtcgctgctttcaacgaccatgtcatgaggacc
tgtctttccggaaagcagctggcctaccgcgaccaggaattcgtcctccaccggaacgga
cagccggaacaggtctggctgaacctcgactactcgccgttgctggataacgacggcaag
cctgtcggcgttatcgccatcgttgtcgaaaccacgggcaaagtgcgggcggaacagagg
ctgagaggcgaaagcgatcgtctgcgcaaaatgttcgagcaggcgcccggctttgttgcg
actgtctccggaccagaccacatttttgaaattgccaacaaagcctacctcgatctcatc
ggcaaccgcgacattttcggcaagccagtacgcgaggccctgccggaagttgtcgaacag
ggatttgtggatcttctcgaccacgtcttcaggtccggccagccgttcatcggtcactct
gcactgatccttctgaagcagcgcagcggggagcaggcggagcgttttatcgatttcatc
taccagcccacgttcgacgagtggggctctgtcaccggcattttcgtccagggcaatgac
gtgaccgaccgccgcgcttccgaggaggcgcttcgggaaagcgaatcacggttcaggctg
atcgctgacaatgcgccggtcatgctctggatggcaaatgccacaggacagagcgtatat
ttcaacgcccggaagcgcgccttctggaatgttgccgaggcggccgtcgccacgtttgac
tggggtgcaaccgtgcatcccgacgacagggatgcgttgcttgccaagctcgaccgtgcg
atgcgccttcaaagtcgtgtcaccctcgaggcacggtatctcgatgccaatgccaactat
cgccttatccagaccgaagctcagccacgctacgacgtggcgggggccttcctggggctg
atcggagtcgatactgacatcaccgacacgcgcttgcaggaagtctatcgctcggcgctg
atttcgctcaacgacagccttcgcgacatcggagaccccgccgatattgctttcaaggcc
gccaggatactcgggcagacaatgaatgtcagccgcgccggctatggcacaatcgatccg
ctacgcgaaaccatcaccatcgaacgtgactggaatgctcccggcatagagactctcgcc
ggcgtgctgcactttcgcgactacggcagttacgtcgaggatctgaagcgaggcgaaacg
gtcgttttttccgatgcgacgaaagatccccgcacgtgcgaaaatgctgccgaactcatt
gccatcagcgcccagtcggtcgtcaacatgcctatttccgagcaaggcggacttgtcgcc
ctgctttatctcaaccatgcgacagcgcgagaatggaagccagaggagcttgccttcatc
cgggaagtggcagagcgcacccgcaccgccgtagagcgccgtcgtgcggagcaggatctc
cagcagctcgccagttccctggagagacaggtggcagcccgtaccgccgatctcgaccgt
gtttggcgaaactctcgggatctgctggtgatcatcggaagcgacgggctgctccacgct
gtcaatcccgcctggccggcggtcctcgggcatgccaagcttgaggtgatcggccgatcg
ttcttcgatttcgtctggccggacgatctgcggctcacaaagcgggcactgcaaggcgcc
gcatcggtggcggatctagaaagcttcgaggctcgcaatcgccataaggacggctcgccc
cgctggatttcatggcggatctcctcgcaggacggcatgatattcgcctatggacgcgat
ataacgtcagagagggagcaagctgcggcgctcgatagggtcgaggaacaactccgccag
gcccagaaaatggaggccataggccagcttaccggcggcgtcgcacacgacttcaacaac
ctcctgcaagtggtatccggcaatctgcatcttctcagcaaggaggtggcggataacgcc
cgggcgcgggcgcgcatcgaaaatgcgctggctggagtcaaccgtggcgcaaagctcgca
gcccagttgttggcattcggccggcgccaggctctcgagcctaaagtgatgaatatcggg
cggttcgtcgccggcatgggggacatgctgggtaggacgatcggcgaggctatcgagatc
gagaccgtccaggcgggcggcctgtggaacaccttcgtcgatcctgcgcagatagaaaac
gccatactcaacctcgcaatcaacgcacgcgatgccatggacggtcgtggtaagctgacg
atcgaggtcggcaatgcctttatcgacgaagcttacgcacacaagcatgtagaggtcgat
ccgggccagtatgtgatgctggccgtcacggataccggtagcggcatccctgcggacatc
atcgaaaaggtcttcgagcccttcttctccacaaagccgctcggcaagggaactgggctt
ggcctgtcgatggtctacggcttcgtcaagcagtcgggcggccacatcaaaatctatagc
gaaaacgggcaaggcacgacgatccgcatctatctgccgcgctcgatgcaggccgaggac
cggcttaccgagatggaattcggaccagccagtggcgggacggaaactatcctggtggcg
gaggatgacgaggacgtacgggcgacagtggtcgagatgctgggcgatctcggctaccgg
gttttgaaggccgtcgatgccgcaagcgcactgaccatcatcgaaagcggcctgccgatc
gatctgctgtttaccgacgtcgtcatgcccggcccgctgaagagcgcggaactggctcgc
aaggccaagcaacgacagcccgacatggcggttctcttcacctcgggctacaccgagaat
tccatcgtccatggcgggcggctcgatgcaggggtcgaattgctgtcgaagccctatagc
cgagacgccctggcccggcgcatccgtcaattgctagaccagcggcaggtcgacatggcg
gcggccgccgaggctgcggtcacgccgctccctgtctccgctccatcgccccgaccgctt
aagttacttgttgtcgaggatgacgcgctgatcaggctcgatactgtcgaacagctccag
gaggcaggccacgacgtggtggatgccagcagcgccgaggaggcgctggtgctggtgaag
tccgaacgcttcgacatcctgctgaccgatctcggactgccaggcctttccggtggtgaa
ctggcggagaagatccgggcaatctacccccagatgggcatcattttcgcgacgggcaat
gcggagatgcctgccgtctccaccggtccgaaacctgttttgctgcaaaagccctacaac
aaccgtagccttctgcgcgcagtcggctccgcctga
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