Rhizobium tumorigenes: PR017_27250
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Entry
PR017_27250 CDS
T08990
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtu03000
]
PR017_27250
Transcription factors [BR:
rtu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PR017_27250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_Tnp_ISL3
HTH_IclR
Crp
HTH_Crp_2
HTH_24
HTH_38
MarR
HTH_AsnC-type
HTH_7
HTH_3
MarR_2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
WFR99336
UniProt:
A0AAF1KUB3
LinkDB
All DBs
Position
unnamed3:complement(56128..57153)
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AA seq
341 aa
AA seq
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MVTIKEIANAVGVSSATVSRVLNYDATLSISASKRQAVIETAEALNYATPRSRNRANGLN
GAQALVSGAGRIALVHFLRPPQELTDPYYIGVRLGIENRCRALQIDVVKVYHADSLPDAT
LLREASGVIAIGRHTDEEVEWLREHSRTVVFADFSPQIDLEDSVESNIQLAMRKLLSALR
ERGYRRIGFIGWLEHINQVPNHFTERRCRTYIEWMKQHDLFDPELCVTEHLTPDSGYTLA
KALMQIASPPDIIVACNDNMAIGAYRAMLELGLKIPEDVAIASFNDIPVAQLLNPPLSTV
RIPAELIGETAVDLLLERFAGRDIVKTVILSTDIIWRESTR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgatcaaggaaatagcaaatgcggtcggcgtctcctcggctacggtttcccgc
gttctgaactacgatgcgaccttgtcgatttccgcgtccaagcgccaggccgtcatcgaa
accgccgaggcattgaactatgcgacgccgcgcagccgcaacagggcaaacggcctcaac
ggcgcgcaagcgctggtctccggcgcgggacgcattgccctcgtccatttcctgcggccg
ccgcaggagctgacagatccctactatatcggcgttcgcctcggcatcgagaaccgctgt
cgcgcgctgcagatcgatgtggtgaaggtctaccacgccgacagcctgccggatgcaacc
ctcctgcgcgaggcctcgggcgtcatcgccatcgggcggcatacggacgaggaggtggaa
tggctgcgcgaacacagccgtacggtggtttttgcggacttttcaccgcagatcgacctc
gaggacagtgtcgagagcaacattcagctggccatgcgcaagctgctctctgcactccgc
gagcgcggctaccggcgcatcggctttattggctggctcgaacatatcaaccaggtcccc
aatcacttcaccgagcggcgctgcaggacctatatcgagtggatgaagcagcacgacctt
ttcgacccggagctttgcgtcaccgagcacctcacccccgacagcggctacacgcttgcg
aaagcgctgatgcagatcgcatcgccgcccgacatcatcgtcgcctgtaacgacaacatg
gccatcggcgcctaccgggcgatgctggaactcggcctcaagatcccggaggatgtggcc
attgccagcttcaacgacattccggtggcgcagctgctcaatccgccgctgtcgaccgtg
cgcataccggccgaactgatcggcgagaccgctgtcgacctgctgctagagcggtttgcc
ggccgcgatatcgtcaagacggtgatcttatccacagacattatctggcgagaaagcacg
cgctga
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