Rathayibacter toxicus 70137: TI83_04995
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Entry
TI83_04995 CDS
T03670
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00470
D-Amino acid metabolism
rtx00550
Peptidoglycan biosynthesis
rtx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TI83_04995 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TI83_04995 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtx01011
]
TI83_04995 (murD)
Enzymes [BR:
rtx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
TI83_04995 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rtx01011
]
Precursor biosynthesis
Amino acid ligase
TI83_04995 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox_2
F420_oxidored
Pyr_redox
3HCDH_N
2-Hacid_dh_C
ThiF
Motif
Other DBs
NCBI-ProteinID:
AJM77476
UniProt:
A0A0C5BDZ6
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All DBs
Position
1103288..1104832
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AA seq
514 aa
AA seq
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MIDPALTPRLDGLRSWHSDWRGLRVAVLGLGVTGFSAADTLAELGSDVLVLADRADEQRE
RMLAVIGARLHRTEHLDSVPHELSSFAPDLMIVSPGFRPTHPIIRWAQEAGIALWGDIEL
AWRLRDKVVRADGSPADWLVVTGTNGKTTTVQMTAAMLVAGGLRAAPCGNIGIPVLDAVR
DPQGFDVLVVELSSYQLHYLGAIEPLASTCLNIADDHLDWHSSFEKYRAAKGKVYAGTRF
ACIYNRADALTEQMVVDADVREGARAIGFGLDVPGPSGFGVVDGILCDRAFLEDRRTTAL
ELVTVAELAERQLAAPHIVQNVLAAAALSRACGVDPRAIRRALATFELDAHRVQLVAEKS
GVTWVDDSKATNPHAANASLRAYPSVVWLVGGVLKGVDVDALVASHVGRLRGVVVIGAER
TALLEAFRRHAPAVPVREVIPDDTGAVMQVAVEAAAALAREGDVVLLAPAAASMDQFLDY
AARGRSFAVAVATYLQGGADDRSDNEPPGGRPAH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcctgcacttaccccccggcttgacgggcttcgcagctggcattccgactgg
cggggccttcgagtcgcggttctgggcttaggtgtgaccgggttctcggctgccgacacg
cttgctgagctgggctctgacgtgctcgtgctcgccgatcgggctgatgagcaacgcgag
cgaatgctggcggtgatcggagcacgtctccatcgcactgaacacctcgattccgttccc
cacgagctatccagctttgcccccgatcttatgatcgtttcgccgggttttcgccccacg
catccgattattcggtgggcacaggaagcgggcattgctctctggggcgatatcgaactc
gcctggcgtctgcgggataaagttgtgcgtgctgacggttcacccgccgactggctggtg
gtgacaggcaccaacggtaagacgacaaccgtgcaaatgaccgcggcgatgctggtcgcc
ggaggcttacgggctgccccctgcgggaacatcgggattccggtgctcgacgccgtccgc
gatccgcagggtttcgacgttcttgtggttgaactctcgagctatcaattgcactacctc
ggcgcgatcgagccgctcgcgagcacctgcctcaatatcgctgacgatcatctggattgg
cacagttccttcgaaaagtatcgcgccgccaaaggcaaggtctatgccggaactcgcttt
gcatgcatctataaccgcgctgatgcgctcacggagcagatggtcgtggacgccgacgtg
agggagggtgcacgcgccatcggtttcggcctggatgtacccggtccgagcggattcggt
gttgtcgacgggatcctctgcgaccgtgcttttctcgaggaccgccgcaccactgcgctc
gaacttgtcaccgttgctgaactcgccgagcgtcagcttgctgcgccgcatatcgtacaa
aatgtgcttgctgccgccgctctctcgcgggcctgcggggttgacccacgtgcgattcgt
cgcgccctcgccaccttcgagttggatgctcaccgcgtccagctcgtggcagaaaaatct
ggagtgacctgggttgacgattccaaggcgacgaatccgcatgcagccaacgcttcactg
cgcgcttacccttctgtcgtatggcttgtcggcggtgtgctcaagggggtcgatgtcgat
gcgcttgtggcttcacacgttggacggctccgtggtgtcgtggtgattggtgctgaacgg
acggcattgttggaggcattccggcgacacgcgcccgcggttcccgttcgtgaggtgatc
ccggatgacactggtgcggtgatgcaggtggctgtcgaggccgcagcagcgttagcccgc
gaaggcgatgttgttctgctcgcacctgccgcggcgtcgatggaccagttcctcgattac
gcggctcgaggccgctctttcgcggtagccgtggcgacatatctacaaggaggagcagat
gaccgctccgacaacgagccgcccggcggccgacctgcgcactga
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