Rathayibacter toxicus 70137: TI83_05485
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Entry
TI83_05485 CDS
T03670
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00300
Lysine biosynthesis
rtx00470
D-Amino acid metabolism
rtx01100
Metabolic pathways
rtx01110
Biosynthesis of secondary metabolites
rtx01120
Microbial metabolism in diverse environments
rtx01230
Biosynthesis of amino acids
Module
rtx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TI83_05485
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TI83_05485
Enzymes [BR:
rtx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TI83_05485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJM77539
UniProt:
A0A0C5BEV8
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All DBs
Position
complement(1212866..1214125)
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AA seq
419 aa
AA seq
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MTTLDTAVRASAPTGADLADIANTFGTPVWVYDAHSIRARVEQLQRFDVIRFAQKACSNV
HILRLMRELGIQVDAVSAGELERALVAGYAVGNGLDEIVFTADLLDRPTLSRVLELGIPV
NAGSPQMLEMVGAVSPQHPVWIRVNPGFGHGHSRKTNTGGEHSKHGIWHENLSESLHLID
HYDLDLVGLHMHIGSGVDYSHLSRVCDAMVTQVTSLGRDIRAISAGGGLSVPYVHGEPEI
NIDEYFRLWDSARREIENHIGHSIRLEIEPGRFLVANSGSLIAEVRAHKDVGSHHFVLVD
AGFNDLMRPAMYGSHHAVSAISSSGEELTDNPAPSILAGPLCESGDVFSQDSNGDVTSIP
LPRVAVGDYVVFHDTGAYGASMSSNYNSRPLAPEVLVDKGTVTQIRRRQTIDELLALEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgacgactctagacacagccgtacgggcatcggcaccaacgggagccgacctcgctgat
attgcgaatacgttcggcactccggtgtgggtttatgacgcgcactcgatacgtgcgcga
gtcgagcagctacagcgatttgacgtcatccgcttcgctcaaaaggcatgttcaaacgtg
catattctgcgcctgatgcgcgaactcggcatacaggtagatgcggtatcagctggcgaa
ctcgagcgtgcgcttgttgcgggctatgcagtcggcaacggtcttgacgagatcgtcttc
acggccgatctactcgatcgcccgacactgtcacgggtcctcgaactaggcatcccggtc
aacgccggctctcctcagatgcttgagatggtgggggccgtttcaccacagcaccccgtc
tggatccgggtgaaccctgggttcggacacgggcacagtcgaaagacgaacacgggtggt
gagcacagcaaacacggcatctggcacgagaacctgtcagagtcgctccatctcattgac
cactacgaccttgatctcgtcggacttcatatgcacatcggttccggtgtggactatagc
cacctctcacgtgtgtgcgacgcgatggtcacgcaagtgacgtccctcggcagggacatc
cgggcgatttccgccggaggagggctctcggtaccctacgtccacggcgaacccgagatc
aacatcgacgaatacttcaggctctgggattctgcccgccgcgagatcgaaaaccacatc
ggtcattccattcgcctcgaaatcgaaccggggcgttttctcgtcgcgaactccggatcc
ctgatcgctgaagtgcgtgcgcataaagacgtcggctcacatcacttcgtcttggtcgac
gcaggtttcaatgacctcatgcgcccagcaatgtacggaagtcaccacgccgtcagcgcc
atctcatccagcggcgaagagttgacggacaaccctgctccgtcaatcctcgcagggccg
ctgtgcgaatcaggcgacgtcttctcgcaagacagcaacggcgacgtcacctcgatcccg
cttccccgcgtcgccgtcggcgactatgtcgtgttccatgacacaggggcatacggggcc
agtatgtcgtcaaactacaactcacgcccccttgcccccgaggtcctcgtggacaaggga
acagtcacacagatcaggcggcggcagaccatcgatgaattgctagcactagaactctag
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