Rathayibacter toxicus 70137: TI83_05795
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Entry
TI83_05795 CDS
T03670
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00061
Fatty acid biosynthesis
rtx00071
Fatty acid degradation
rtx01100
Metabolic pathways
rtx01212
Fatty acid metabolism
rtx02024
Quorum sensing
rtx04146
Peroxisome
Module
rtx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TI83_05795
00071 Fatty acid degradation
TI83_05795
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TI83_05795
09145 Cellular community - prokaryotes
02024 Quorum sensing
TI83_05795
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtx01004
]
TI83_05795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtx04147
]
TI83_05795
Enzymes [BR:
rtx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TI83_05795
Lipid biosynthesis proteins [BR:
rtx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TI83_05795
Exosome [BR:
rtx04147
]
Exosomal proteins
Exosomal proteins of breast milk
TI83_05795
Exosomal proteins of breast cancer cells
TI83_05795
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6907
Motif
Other DBs
NCBI-ProteinID:
AJM77584
UniProt:
A0A0C5BEY9
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All DBs
Position
complement(1279100..1280785)
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AA seq
561 aa
AA seq
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MSIHSPRPWLRSYAPGVPTELTLPSGSLIDIITESARLYPHQVALEFFGRSTSYRQLADE
IEKAAEGLRRLGVRSGDPVALILPNCPQHVVAFYAILRLGAVVVEHNPRYTPRELRHQFE
DHGARIAIAWDRVVPTVQDLPEDVGVTTVIAVDLTRALPTGLRVALRLPLPRSRRFRAAL
TGPERGAVRWESLLRHRLSPAQPRPTAEDLAVIQYTSGTSSTPKGAELTHANLTANAAQA
RAWIPQVNRGHCVVYAVLPMFHAYGLTLCLTFAISMGARLVLFPTFDPDLVLKAMRKHPA
TFLPAVPPIAERLVSRARERGISLKGIEIAISGAMPLDTALVASFEAQTSGMLVEGYGLS
ETSPIVTANPAGATRRAGTVGLPLPGTDVRIVDPDAPENERAPGEQGELVVRGPQVFRGY
HGKPDETAASFTTDGWFRTGDIASLDDDGFVRIVDRLKELIITGGFNVSPSEIEEVLRGL
PGIREAAVVGLPDAHSGESIVAAVVLEPGAHFDQEAARSMARDKLTAYKVPQRIVVVDEL
PLNMMGKVLRRKVAALLLDQN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattcactcgccccgcccctggctccgcagctatgcacccggcgtgccgacagag
ctcaccctgccctccggatcgctgatcgacatcatcacggaatccgctcggctctaccca
caccaagtcgccctcgaattcttcggccgctcgaccagctaccgtcagctggcggacgag
atcgagaaagctgcggaagggttacgccgactcggagtgcgctcaggcgatcctgttgcc
ctgatcctccccaattgcccacagcatgtcgtggcgttctacgccattttgaggctgggc
gcagtggtggtggagcacaatccgcgctacacaccgcgggagctccgccaccagttcgag
gaccacggcgcgcgaatcgccatcgcctgggatcgcgtggttcccaccgtgcaggatctg
ccggaagatgtgggcgtcaccaccgtgatcgcagttgacctcacgcgggcactgcccaca
ggtctccgcgttgccctgcgccttccgctacctcggtcacgccgcttccgcgccgccctc
accgggccagagcgcggagccgtcaggtgggagtcgctgctacgccatcgtctcagccct
gcgcagccgcggccgaccgcggaagatctcgccgtgatccagtacacgagcggcaccagc
agcacacccaaaggcgccgaactcacgcacgccaacctcaccgctaatgcggcacaggca
cgagcctggatcccccaagtgaaccgcggtcactgcgtcgtctacgcagtactgccgatg
ttccacgcctatggcctgacactctgtctcaccttcgccatcagcatgggtgcacggctc
gtactgttcccgacgttcgatccggacctggtgctgaaagccatgcgcaagcatccggcg
acgtttttgcccgcggtaccgcccatcgccgaacgactggtatcgcgagctcgggaacgc
ggcatttcgctgaaaggcatcgagatcgcgatttccggagcgatgcccttggataccgcc
ctggttgcctccttcgaagcccagaccagcgggatgctcgtcgagggatacgggctctca
gaaacctcgccgatcgtgacagctaacccggcaggggcaacccgccgcgccggaaccgtc
gggctaccgctgccgggcaccgacgtgcggattgtcgatcccgacgcacccgaaaatgag
agggcaccgggcgaacagggtgaactcgtggtgcgaggcccgcaagtgttccgcggctat
cacggcaaaccagacgagacagcggccagcttcacgaccgacggctggttccggaccggc
gatatcgcgtccctcgatgacgatggctttgtccggattgtcgatcggctgaaggagctc
atcatcaccggcggctttaacgtctcaccctccgaaatcgaggaggtgctgcgcggcctg
cccgggatacgggaagccgcggtggtggggctgccggacgcccacagcggcgagtcaatt
gtggcggcggtcgtccttgaaccgggagcgcacttcgaccaggaggcggcgcgctcgatg
gcacgtgacaagctgaccgcgtacaaagtgccgcagcgaatcgtcgttgtcgatgagctg
ccactgaacatgatgggcaaagtcctgcgacgaaaggttgccgcgctgctgctagaccag
aactaa
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