Rathayibacter toxicus 70137: TI83_05850
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Entry
TI83_05850 CDS
T03670
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rtx
Rathayibacter toxicus 70137
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TI83_05850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtx03019
]
TI83_05850
03009 Ribosome biogenesis [BR:
rtx03009
]
TI83_05850
Messenger RNA biogenesis [BR:
rtx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TI83_05850
Ribosome biogenesis [BR:
rtx03009
]
Eukaryotic type
Pre-60S particles
RNases
TI83_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJM77589
UniProt:
A0A0C5BEZ4
LinkDB
All DBs
Position
complement(1288138..1288773)
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AA seq
211 aa
AA seq
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MSNATDRLATDRLVWIDCEMTGLDLAVDELVEIAVVVTNFELEPLDEGLSIVIRPDASAL
ENMGEFVRSMHETSGLLAEIPSGVNVAEAEYQALEYVLAHVPAEQHAPLAGNSIGTDRAF
LAKYMPRLDSHLHYRNVDVSTLKELSRRWFPRIYFNAPAKQGGHRALADILESIRELSYY
RRALFVAQPGPSTAQAQAASAATMAEFTSQM
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgcgaccgaccggcttgcgaccgaccggcttgtctggatcgactgcgaaatg
accggactcgatctcgccgttgatgaacttgttgagatcgccgtcgtcgtcaccaacttc
gaactggagccgcttgacgaggggctgtcaatcgtcattcgacccgatgcttcagcgcta
gaaaacatgggcgagttcgtgcgcagcatgcacgaaacttcgggactgcttgcagagatc
ccgtcaggggtcaacgtcgcggaggccgaatatcaggctctcgagtatgtcctcgcgcac
gtcccggcggaacagcacgccccactggccggcaactcgatcggcaccgaccgcgccttc
ctcgccaaatatatgccgcgcctggacagccatctgcactaccgtaacgtcgatgtcagc
acccttaaagagctgtctcgccgctggttcccgcggatctatttcaacgccccagccaag
cagggcggtcatcgcgcactcgccgatatcctcgagagcatccgcgaactcagctactac
cgtcgtgctcttttcgttgcacagccaggaccatcaacagcccaagcgcaagccgcctca
gccgcgaccatggcggagttcacgtcacagatgtag
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