Rathayibacter toxicus 70137: TI83_06260
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Entry
TI83_06260 CDS
T03670
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rtx
Rathayibacter toxicus 70137
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtx03032
]
TI83_06260
03400 DNA repair and recombination proteins [BR:
rtx03400
]
TI83_06260
Enzymes [BR:
rtx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TI83_06260
DNA replication proteins [BR:
rtx03032
]
Prokaryotic type
DNA Topoisomerases
TI83_06260
DNA repair and recombination proteins [BR:
rtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TI83_06260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJM78409
LinkDB
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Position
complement(1377830..1380280)
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AA seq
816 aa
AA seq
DB search
MSSGSSLTERIEDVDVSAEMEGSFLEYAYSVIYSRALPDARDGLKPVQRRILFMMSEMGL
RPDHGHVKSARVTGEVMGKLHPHGDASIYDSLVRLAQPFTMRVPLVDGHGNFGSLDDGPA
AARYTEARLAPAAIAMTEHLGENVVEFIPNYDNSHEQPEVLPAAFPNLLVNGASGIAVGM
ATNMAPHNLVEVVAAARHLIAHPDASLDDLMAFVPGPDFPSGGTIVGLAGVRDAYATGRG
SFKTRARVSIESITARKSGLIVTELPYLVGAEKVIDKIKDGVQNKKLSGIADVVDLTDRD
NGLRLVIGIKTGFSPEAVLEQLYRYTPLEDTFAINNVALVDGGPRTLGLKELLQVYIDHR
LQVVTRRSRYRLNKRQERLHLVEGLLIAMLDIDEVIQLIRGSDDTAGARGRLIDIFELST
IQADYILELQLRRLTKFSRIELETERDTLVSEIAELEALLASRARLEELVSDELDQVAQR
LGTPRRTLLTEARPSAASTGRKAAAVLEIADVPCRVLLSTTDRIVRFDRDTSALPQPRRV
SRRSKHDAILSMLDTSTRTEIGAVTTAGRLLRFSSVDVPAVPSSSVQLGAGVRMNDYLPH
LAKDERVLALVALDDSRPIGLGTVRGIVKRVFLSELPSRPDIELIALKPEDAVIGAAPAA
DEDELVFVTGEAQLLRFSASAVRPQGRSAAGMAGVKLGETDEAVHFAVVADRERDVVVAT
VAIDSWALSDTDTGSAKVSAFSEFPAKGRATSGVRAQRFLKGETALRVAWVGPGPAHALE
ADGSVATLPESGMKRDSSGVALSTPIASIGAAPELF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctccggatcctccctcaccgagcgcatcgaggatgtcgacgtttcggccgagatg
gagggctccttcctcgaatacgcctattccgtcatttactcacgagccctacccgatgcg
cgcgacggtctcaaacctgtgcagcggcggatcctcttcatgatgagcgagatgggactg
cgccccgatcacgggcacgtgaagtcggcgcgcgtgacgggcgaggtcatgggcaagctg
caccctcatggcgacgcgtctatctacgactccttggtgcgcctcgcacagccctttacg
atgcgcgtgccgctcgtcgatggtcacggcaacttcggttcactcgatgatggtcctgcg
gccgctcgttacacagaagcacgcttggcaccggccgcgatcgccatgacggagcacctc
ggcgagaatgtggtcgagttcattccgaactacgacaattcgcacgagcagccggaggtg
cttcccgcggcattcccgaatctgctggtcaacggggcgagcggtatcgcagtcggtatg
gcgaccaatatggcaccgcacaacctggtcgaggtggtggcagccgcacggcacctcatt
gcgcaccccgacgcttctctcgacgacctgatggcgtttgtgcccggcccagacttcccc
agcgggggtaccatcgtcggccttgccggcgtgcgcgacgcgtacgcaaccgggcgtggc
agcttcaaaacccgcgcccgcgtatcgatcgaaagcatcacggcccgtaaatcgggactt
atcgtcaccgagctgccctacctcgttggtgccgagaaggtgatcgacaaaatcaaggac
ggtgttcagaacaaaaagctcagcggtatcgccgatgtggtcgatctcaccgaccgcgat
aatggcctccgccttgtgatcggaatcaaaaccggtttcagccccgaggctgtgctcgaa
cagctctatcgttacacgccactggaggacactttcgcgatcaataacgtcgcgctagtc
gacggcggcccgcgaacactggggctcaaagaactgcttcaggtgtatatcgaccaccgc
ctccaggttgtcacccgacgctctcgctaccgtctgaacaaacgtcaggagcgcttgcac
ctggtcgagggattgctgatcgcgatgctcgatatcgatgaggtgatccaactcattcgg
ggcagcgatgatacggcgggcgcgcgcggccgcctgatcgatattttcgaactcagcacg
atccaggctgactacatcctcgaactccagttgcgacgtctcaccaagttctcgcggatc
gaactcgagaccgagcgcgacactctcgtgagtgaaatcgccgaattggaggcgttactg
gccagccgagcccggcttgaggagctggtttcggacgaactcgaccaggttgctcagcga
ctcggcaccccgcggcggaccctgctcaccgaggcacgcccgtcggcggccagcaccggt
cgcaaagctgcggctgtactcgagatcgccgacgtgccgtgccgggttctgctgagcact
accgatcggatagtacgctttgaccgcgacacgtcggccctcccgcagccaaggcgcgtg
tcgcgccgcagcaaacatgatgcgattctcagcatgctcgacaccagtacgcgcaccgag
attggcgcagtgaccaccgccgggcgtctgctgcgtttctcttctgttgatgtcccggcc
gttccgtcctcctccgttcagctgggagcgggggtacgaatgaacgactacctcccccat
ctggcgaaagacgagcgggtgctcgctctcgtcgccctcgatgactcgaggccgatcggc
ctgggcaccgtacgaggcatcgtgaagcgggtctttctctccgaactccccagccgcccc
gacatcgagctgattgcgctcaaaccagaggacgctgtcattggtgcagcacctgctgcc
gacgaggacgagctggtgtttgtgacgggagaggcgcagctgctgcgtttctctgcctcc
gccgtgcgcccgcaaggacgaagtgccgcgggcatggcgggcgtgaagctcggtgagaca
gacgaggcagtgcatttcgcggtggttgccgaccgggagcgtgacgtcgtcgtcgccacc
gtcgcgattgatagctgggcactttctgacactgacaccggcagcgccaaggtatcggcc
ttctccgagttccccgccaagggccgcgccaccagcggtgtacgcgctcagcgtttcctt
aaaggcgagacagcgctccgggttgcctgggtgggccctgggcccgcgcacgctctcgaa
gccgacggctcggttgcgacactgcctgagtccgggatgaaacgcgatagctccggggtc
gcgctctctaccccgatcgcgagtatcggtgccgctccggagctgttttaa
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