Rathayibacter toxicus 70137: TI83_06320
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Entry
TI83_06320 CDS
T03670
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtx
Rathayibacter toxicus 70137
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtx03016
]
TI83_06320
Enzymes [BR:
rtx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TI83_06320
Transfer RNA biogenesis [BR:
rtx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TI83_06320
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AJM77657
UniProt:
A0A0C5BSI7
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All DBs
Position
complement(1394191..1395390)
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AA seq
399 aa
AA seq
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MTNYRVLSTRPEFLAAVDALAAGEGPVAVDAERASGFTYSQRAYLIQVYRRGAGTFLFDP
PAIGQMAALQDVIGGEEWVLHAASQDLACLREVGLNPTRLFDTELAARLLGLPKVGLGAV
VEDLLSIHLAKEHSAADWSTRPLPQSWLIYAAKDVELLVDLRDRMEQMLVDARKTRIARE
EFEATLAWQPKAAAADPWRRISGIHSLRGQRHLAVARELWLARDAFARERDIAPGRLIPD
ASIIAVSRNIPSSMKQLAGRRDFTGRASRGEVERWWAAIQRGVTTRDLPSPTRPIPGTLP
PPRAWGDRNPEADARLKAGRTVVAEIAELLSLPVENLLTPNILRRLAWNPPEPLDRDRVA
VELERGGARAWQIDATAGAITTTFVEAAQGRRETGPSTS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgactaattaccgtgttctttcgactcgccccgagtttctcgctgcggttgatgctctc
gctgctggcgagggtccggttgccgtcgacgcggaacgcgcctccggcttcacctattca
cagcgtgcatacctaattcaggtgtatcgacgcggtgcggggaccttcctctttgaccct
cccgctatcggtcagatggctgcgctgcaggacgtgattggtggcgaggagtgggttctt
cacgccgcaagccaggaccttgcatgtctgcgtgaggtcggactcaacccgacccggctt
ttcgacactgagctcgctgcacggttgctgggactgccgaaggttggcctcggtgccgtg
gtcgaggacttgctcagcattcacctggccaaggagcattcggctgccgactggtctact
cgaccactcccccagagctggcttatttatgcggctaaggacgttgagctgcttgtggat
ttgcgtgaccggatggaacaaatgctcgtggacgcgcgcaaaacccggatagcccgcgag
gaatttgaagcgacactggcctggcaaccgaaggctgcggcggccgatccgtggcggcgg
atctcaggaatccattcccttcgtggtcagcgccacctcgcggttgcccgcgagctgtgg
ctggcgcgcgatgcgtttgcccgtgagcgcgacatcgcgccaggtcgcctgattcccgac
gcatccatcatcgcggtctcgcgcaacatccccagtagcatgaaacagctcgctggacgt
cgcgatttcactggtcgtgccagccgaggcgaggttgagcgctggtgggccgcaatccaa
cgcggtgtgaccacccgtgatctgcccagtcccacccgccccatccccggcaccctgcct
cctccgcgcgcctggggcgaccgcaacccggaggccgacgctcggctgaaggccggtcgc
acggtggtggccgagattgccgagctgctctcccttccggtcgagaacctgctcactccg
aacatccttcgtcgcctcgcctggaacccacctgaaccacttgaccgtgaccgcgttgcc
gttgagcttgagcgcggcggtgcgcgggcatggcagatcgatgccactgctggagcgatc
accacgacgtttgtggaagctgcccaaggcaggagggagactggacccagcacgtcgtag
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