Rathayibacter toxicus 70137: TI83_06835
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Entry
TI83_06835 CDS
T03670
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx03030
DNA replication
rtx03410
Base excision repair
rtx03420
Nucleotide excision repair
rtx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TI83_06835
03410 Base excision repair
TI83_06835
03420 Nucleotide excision repair
TI83_06835
03440 Homologous recombination
TI83_06835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtx03032
]
TI83_06835
03400 DNA repair and recombination proteins [BR:
rtx03400
]
TI83_06835
Enzymes [BR:
rtx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TI83_06835
DNA replication proteins [BR:
rtx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TI83_06835
DNA repair and recombination proteins [BR:
rtx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TI83_06835
NER (nucleotide excision repair)
GGR (global genome repair) factors
TI83_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AJM77737
UniProt:
A0A0C5BSR1
LinkDB
All DBs
Position
complement(1507446..1510115)
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AA seq
889 aa
AA seq
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MSDPEQPTLLLVDGHSLAFRAFYALPVESFQTREGQHTNAIHGFLSMLILLVKNEKPTHL
AVAFDISRYSFRTREYPDYKGTRGETPPEFKGQVPLLEEALHAMNIRTLAKEDFEADDIL
ATLARQGEDAGFRVLVVSGDRDAIQLITPQVTLLYPSTQGVSQLTRYDRDKVFEKYGVEP
HQYPEIAALVGETSDNLPGVDKVGPKTAAKWVNQYGTVADIVAHADDIKGVVGEKLREQK
ENALRNRRLNRLVTTVELSLGPADLGRQPINPDAVREVFTRLEFKTLQQRVLTIAAEEGV
EGAVSVLAGDTVTTAAPATSTMVDEELEHWLDRVSAKGTAPVAVQVQLGAVGVEGIGLSV
QKESVFVPWAVGRPDYTALEQWLASDAPKYFADAKPQIKALRGVGMTVAGLAFDTRLAAW
LLQPTGHAATVSAQVSQYLDETVVQGDPNQLVPLAEPLGSATEAWYVFRLVSVLTELLGD
EMLSVLVDIELPIVQVLATMELTGVAIDTEILMHLRGELTTAAAELARRAFAEIGHEINL
GSPKQLQQVLFDELAMPKTRATKTGYTTDASALIDLQELHPHPFLGLLLEHRDATKLKQI
IETLEKSVADDGRIHTSYDQTGTATGRISSNDPNLQNIPIRSDVGRRIRTAFVHSEGAST
LLTADYSQIEMRIMAHLSGDTGLIEAFHSGEDLHRFVGARIFRVEPTEVTSAMRNKVKAM
SYGLAYGLSAFGLSKQLRISSAEAKQLMTDYFVRFGGVRDYLRGVVEQARKTGYTETIFG
RRRPFPELTSANRVLRDNAERAALNSPIQGSAADIMKLAMIGVHSDIEKHGLGSRMLLQV
HDELIFDAAPGEEEALEGIVRQRMAGAAELRVPLEVQVGHGPHWDAAGH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatccggaacagcctaccctcctgcttgtcgacggccattccctggcttttcgg
gcgttctacgctctcccggtagagagttttcagacccgcgagggtcagcatacgaatgcg
atccacggctttttgtcgatgcttatcctgctagtgaagaatgagaagcccacgcacctc
gccgtcgcgttcgatatttctcgctactctttccgcacccgcgaatatcccgactacaag
gggacccgtggcgagactccgcccgaattcaagggtcaagtgccccttctcgaggaggcg
ctgcatgcgatgaatatccgtactctggccaaagaggatttcgaggcagatgatattctc
gccactctcgcccgccaaggcgaggacgcaggttttcgcgttctcgttgtctcgggtgac
cgcgacgcgatccagctgattaccccccaggtcaccctgctctacccctcgacccagggt
gtctcgcagctcacccgatacgaccgcgacaaagtcttcgagaagtacggggtcgagccg
caccaataccctgagatcgcggcgcttgtcggtgagacgagcgataatttgcccggagtc
gataaagtcggccccaaaacggcggccaaatgggtcaatcagtacgggacagtagccgat
attgtcgcgcatgccgacgacattaagggagtagtcggcgagaagctgcgcgagcaaaaa
gagaacgcgcttcgcaaccgtcggcttaaccgtctcgtcaccaccgtcgagctgtcgctc
ggtcccgccgatctcgggcgccaacccattaaccccgatgccgtccgtgaggtcttcacc
cgtcttgaattcaagacattgcaacagcgggtactcacaatcgccgccgaggagggcgtt
gagggcgccgtgagcgtcctggcgggcgacactgtgacgaccgccgcacccgctaccagc
acgatggtggacgaagaactcgagcattggctcgatcgcgtgtcagcgaagggcacagct
ccggttgccgttcaggtgcaactcggcgcggtcggcgtcgaaggtatcggcctgtcggtc
cagaaggaatcggtcttcgttccgtgggcggtaggccgccccgactacacggcgctcgag
cagtggctggcaagcgacgcgcccaaatacttcgctgacgcaaaaccgcagatcaaggct
ttgcgtggcgttggtatgactgttgcgggcctggcgttcgacacccgtcttgctgcctgg
ctccttcagccgaccggccacgctgcgaccgtgagtgcgcaggtgtcgcagtacctcgac
gagacagtggtgcagggcgacccgaaccagcttgttcccctcgccgagcctctggggtcg
gccaccgaggcctggtatgtatttcgactcgtgagcgtgctgaccgagctgctgggcgac
gagatgctctcggtgttggtcgatatcgaactccccattgtccaggtgctcgcgacgatg
gagctgaccggagtcgcgatagataccgaaattctgatgcaccttcgcggcgaattgacc
acggcggcggccgagctggcacgtcgcgcctttgccgagatcgggcacgaaataaatctc
ggctctcctaagcagttgcagcaggttctcttcgacgaactggctatgcccaagacccgc
gcgactaagaccggctatacgactgacgcctccgccctgatcgacctgcaggaattgcat
ccccatccttttctcggtctgttgctcgagcaccgcgatgcgaccaagctcaagcaaatt
attgagaccctcgaaaagtccgtggctgatgatggccggatccacaccagctacgaccag
accggcacggcgactggccgcatttcctcgaacgaccccaaccttcaaaacattccgatc
cgaagcgatgtgggccgccgtatccgtaccgcttttgtgcacagtgagggggcgagtaca
ttattgaccgctgattactcgcagattgaaatgcggattatggcgcacctttctggtgat
acgggactcatcgaggcattccacagtggcgaggatttgcatcgctttgtcggcgcgcgg
attttccgcgtcgaaccgacagaggtgacctcagcgatgcgcaataaggtcaaggcgatg
tcgtatgggcttgcatatgggctcagtgccttcggcctgtccaagcaattgcgcatctcg
agcgccgaggccaagcagctgatgaccgactactttgtgcgcttcggaggggtgcgtgat
tatctccgcggcgtcgtcgagcaggcgcgaaagaccggttacaccgaaaccattttcggc
aggcgtcgcccgttccccgaactcaccagcgccaatcgtgtgcttcgtgataacgcggag
cgcgccgcccttaattcgccgatccaaggttctgccgccgacatcatgaagctcgccatg
atcggcgtgcactccgatatcgagaaacacgggctcggctcccggatgctgctgcaggta
cacgacgagttaatcttcgacgccgctcccggcgaggaagaggcgctcgaaggcattgtc
cgtcagcgaatggctggcgcagccgagctgcgtgtcccgctcgaggtgcaggtcggccac
ggtccgcactgggatgcggccgggcactga
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