Rathayibacter toxicus 70137: TI83_09025
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Entry
TI83_09025 CDS
T03670
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00020
Citrate cycle (TCA cycle)
rtx00190
Oxidative phosphorylation
rtx00650
Butanoate metabolism
rtx00720
Other carbon fixation pathways
rtx01100
Metabolic pathways
rtx01110
Biosynthesis of secondary metabolites
rtx01120
Microbial metabolism in diverse environments
rtx01200
Carbon metabolism
Module
rtx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rtx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rtx_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TI83_09025
00650 Butanoate metabolism
TI83_09025
09102 Energy metabolism
00190 Oxidative phosphorylation
TI83_09025
00720 Other carbon fixation pathways
TI83_09025
Enzymes [BR:
rtx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
TI83_09025
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
AJM78043
UniProt:
A0A0C5BB17
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All DBs
Position
2007302..2009134
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AA seq
610 aa
AA seq
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MSTAGNTYGVEQSASDHTVGPDGVHYHRFDVVIVGAGGAGMRAAIEAGPKAKTAVLSKLY
PTRSHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLE
NMGLPFNRTGEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQTLFQNCVKLGINF
YNEFYVLDLVMTEVDGVHKPSGVVAYELATGELHVFQAKAIVFATGGFGKIYKTTSNAHT
LTGDGVGIIWRKGLPLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNASGERFMERYA
PTIKDLAPRDIVARCMVQEVTEGRGAGPHKDHVLLDCTHLGAEVLETKLPDITEFARTYL
GVDPVVEPVPVMPTAHYAMGGIPTNVKAEVLSDNTTVVPGLYAAGECACVSVHGSNRLGT
NSLLDINVFGKRSGNNAADYAATVDFTPLPTDPAGPVREMLTSLRNATGTERIAAIRKEL
QDEMDKNAQVFRTDESLEAVTGTIQRLRDRFRNISVHDKGRRFNTDLLEAVELGFLLDLA
EVVVYSARNRKESRGGHMRDDYPQRDDENYMQHTMAYLSGDAHSSDAGDHIRLDWKPVVI
TRYQPMERKY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagcaggtaacacctacggcgttgaacagagcgcctccgaccacaccgtcgga
ccagacggcgtccattatcaccggttcgatgtggtgatcgtcggtgccggcggcgccgga
atgcgagcggctatcgaggccgggcccaaggcgaaaactgccgtgctctccaagctttat
ccgacacgctcacacaccggcgccgcacagggcggcatggctgccgccctcgccaatgtc
gaggaggacagctgggaatggcacacctttgacaccgtcaaaggcggcgactatctcgtc
gatcaagacgcggccgaaattctcgccaaagaggcgatcgatgctgttatcgacctagaa
aacatgggcctgcccttcaaccgcaccggcgagggcagaattgatcagcgtcgcttcggc
ggacacacccgcgatcacggcaaggcacccgttcgtcgggcctgctacgcggccgaccgt
accggccacatgatcctgcaaacactgttccaaaactgcgtcaaactcgggatcaatttc
tacaacgagttttatgtgctcgatctggtgatgacggaggtcgacggcgttcacaagccc
tcaggcgtcgtcgcctacgagctagcaaccggcgagctgcacgtgttccaggccaaagca
atcgtcttcgcgacaggcggcttcggcaagatctacaagaccacgtccaacgcgcacacc
ctcaccggcgacggcgtgggtatcatctggcgcaagggtctgccgctagaggacatggag
tttttccaattccaccccaccggacttgcgggcttaggcatcctgctgacagagggtgcg
cgcggagagggcgcgatcctgcgcaatgcctccggtgagcgtttcatggagcgttatgcc
cccacgatcaaagacctggcgccgcgcgacatcgtcgcccgctgcatggtgcaggaggtg
acggaggggcgcggggccggcccacataaagaccacgtcctgctcgactgcacccatctg
ggcgcggaggtgctcgaaaccaagctccctgatatcacggagttcgcgcgcacctatttg
ggcgtcgatccggtcgtcgagcccgttcccgtgatgcctaccgcgcactacgcgatggga
ggcatcccgaccaacgtgaaggcggaggtgctctcagacaatacgacggtcgtccccggt
ctctatgcggcgggtgagtgcgcgtgtgtatcggtacacggctcgaaccgtttgggcacc
aattcgcttctggatatcaatgtcttcggcaagcgcagcggcaacaacgccgccgactac
gcggcaacggtggacttcaccccgctgccgaccgacccggccggaccggtccgggagatg
cttacctcgctccgaaacgccaccggaaccgagcggattgccgcgatccgcaaggagctg
caagacgaaatggataaaaacgcgcaggtgtttcgcaccgacgagtcattggaggcagtc
accggtacgatccagcgcctccgcgaccgtttccgcaacatttcggtgcacgacaaaggc
agacgctttaacaccgatctactcgaggcggtcgaattgggctttttgctcgacttggcc
gaggtggtcgtttattccgctcggaaccgcaaagaaagtcgcggcgggcatatgcgcgat
gattatccccagcgcgacgatgagaactatatgcagcacaccatggcgtacctctccggc
gacgcccactcctccgatgccggagaccacatccggctcgactggaagcccgtcgtgatc
actcggtaccagccgatggagaggaagtactaa
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