Rathayibacter toxicus 70137: TI83_09340
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Entry
TI83_09340 CDS
T03670
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rtx
Rathayibacter toxicus 70137
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtx03032
]
TI83_09340
03400 DNA repair and recombination proteins [BR:
rtx03400
]
TI83_09340
Enzymes [BR:
rtx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TI83_09340
DNA replication proteins [BR:
rtx03032
]
Prokaryotic type
DNA Topoisomerases
TI83_09340
DNA repair and recombination proteins [BR:
rtx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TI83_09340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJM78085
UniProt:
A0A0C5BIH5
LinkDB
All DBs
Position
complement(2065759..2068590)
Genome browser
AA seq
943 aa
AA seq
DB search
MSGTKKLVIVESPAKAKTIAQYLGDEYEVLASIGHIRDLIEPKNLPPELKKGPLGKFSVD
VDNGFEPYYVVSDQKKKTVADLKRALKNADELYLATDEDREGEAIAWHLLEELKPKVPVH
RMVFHEITKDAIQKARNSTRAIDTSLVDAQETRRILDRLYGYEVSPVLWRKVGPGLSAGR
VQSAATRLVVDRERERLAFVSASYWDLATVLAPEGDVSKGFGARLARLGGKRVAGGRDFD
DRGQLKGDVTVLDEAAAKALADALRDSATAVRVSNLESKPYSRRPAAPFTTSTLQQEAAR
KLRFSARQTMSVAQSLYENGYITYMRTDSPGLSQQAVNAARSQAAALYGPETVPDKPRLY
AGKSKNAQEAHEAIRPAGETFRTPDQLSGTLRGNDLRLYELIWKRTVASQMADAKGATAT
VTLLAELAGETARTAEFTASGTVITFRGFLLAYEEGRDEERHAMRDEKDAKLPPLEVGQS
VVVAEVEAKGHETLPPPRYTEASLVKTLEELGIGRPSTYASIISTIVDRGYVTPRGTALV
PNWIAFSVVRLLEDFFSELVEYDFTAEMEGDLDKIAGGEEDRVSWLNRFYFGGGSHPGLR
HVVDNLGEIDAKGINSLRITDDITLRIGKYGPYLEVVEKGAEAPRRVNLPPELAPDELTP
AKARELIDAPVQTDRVLGSNPDTGKIVVVKDGRFGPYVTEIDPEPSPAADPASGEAAQPA
PTVRGARKTAAVKPRTSSLFKSMDIASIDLATALRLLDLPRIVGEDPQTGEQITAQNGRY
GPYLKKGTDSRSLTSEDQIFDIDLPEALAVFAQPKYGARRASSALKEFEADPVSGKPIRI
RDGRFGAYVTDGETNVTIPRGQTIEEIDFEQAVQMLADKRAKGPAKKTSAKKASEKKTTA
KSTAAKSRATAATKSSVTKKPRKTATTRAEETTATDAAGATQS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcacgaagaaactggtgatcgtcgagtccccggcgaaagccaagaccattgcc
caatacctgggtgatgaatacgaggtgctcgcctccattgggcacattcgtgatctgatt
gaacccaagaatcttccgccggagctgaagaagggtccgctcggcaaattttccgttgac
gtcgacaacggttttgagccctactatgtcgtgtcggatcagaaaaaaaagacggtggcc
gaccttaaacgggcgctgaagaatgccgatgagctttatctcgccactgatgaagatcgc
gaaggcgaggccattgcctggcatctcctcgaggaactcaagcccaaggttcccgtgcac
cgcatggttttccacgagattaccaaggacgcaattcagaaggcgcgcaacagtacccgt
gccatcgacacctcgcttgttgacgcgcaagagacccggcggattctcgatcggctctat
ggctacgaagtttcgcccgtgctctggcgcaaggtgggtcccggcctctcagctggacga
gtgcagtcggcagcgacccgtctcgtcgttgaccgtgagcgcgagcgtctcgctttcgtg
tccgcctcctactgggaccttgcgaccgtgcttgcccccgagggtgacgtttcgaaaggc
ttcggcgcccgcctagcacggctcggaggcaagcgcgttgccggcggtcgcgacttcgac
gaccgtggacagctcaagggcgacgttactgtccttgacgaggcggcagcaaaggcgctc
gccgacgcgctgcgtgactcggcgacggctgtgcgtgtctcgaacctcgaatcgaagccc
tactcgcgccgaccggccgcacccttcaccacctccacgctccagcaagaggcggcgcgc
aagcttcgtttctcggcaaggcagacgatgagcgttgcgcaatctctctatgagaacggt
tacatcacctacatgcgcaccgactcccctgggctttcacagcaggcggtgaacgcagcc
cgttcccaagccgcagcgctctatggccccgaaaccgtgccggacaagccccggttatac
gcgggcaagagcaagaacgcgcaggaggcgcacgaggcgattcgccctgcaggcgagacc
tttcgcacccccgaccagctctctggaacgttgcgcggcaacgaccttcgtctgtatgag
ttgatctggaagcgcactgttgcctcacagatggcggacgccaagggagcgaccgcaact
gtgaccctgctggctgagcttgcaggcgagacagcgcgcactgccgaattcaccgcctct
ggaaccgttatcaccttccgcggtttcctgctcgcttatgaagaagggcgcgacgaggaa
cgtcacgctatgcgcgatgagaaggacgccaaactgcctccgctcgaggtcggccagagt
gtggtcgttgcggaggtcgaggcaaagggtcatgagactttgccgccgccgcgctatacc
gaggcgagcttggtgaagacgctcgaggaacttggtatcggccgcccgtcaacctacgca
tcaatcatctccactatcgtggaccgcggttatgtgactccgcgcggcaccgctcttgtg
cctaactggattgctttttccgtggtgcgtttgctcgaggatttcttctccgaactggtc
gaatacgatttcacagctgagatggagggagatctcgacaaaatcgctggcggtgaggag
gaccgggttagctggcttaaccgtttctacttcggtggcggcagccaccccggattgcgt
cacgtcgttgataatctcggtgagatcgacgctaagggcattaactctcttcgcatcacc
gacgacatcaccctccgcatcggcaaatatggtccctatttagaggtcgtagagaaaggt
gcggaggcgccgcgccgggttaacctgccgccggagttagcgcctgacgaactcactccg
gccaaggcacgagagcttattgatgctccagtccagactgatcgggtgttgggtagcaat
ccggacaccggcaaaatcgtcgtggtcaaggacggccgatttggtccctatgtaaccgaa
attgatccggaacctagtccggccgccgatcccgccagtggagaggcagcccagcccgcg
cccaccgtgcgtggcgcgaggaagaccgcggccgtcaagccgcgcacctcctcgcttttc
aagtcaatggatattgcgtcgatcgatcttgcgactgccctgcgcctgcttgacctgcca
cgcatcgtcggtgaagatccgcagacgggagaacagatcaccgcgcaaaacggtcggtac
ggtccttatctcaagaagggcaccgatagccgctctctcaccagtgaggaccagattttc
gacatcgatctgccggaagcactcgcggtgttcgcgcagcccaagtacggtgcccgccgc
gcgtccagcgccctcaaagagttcgaggccgaccccgtcagcggcaaaccaattcgtatt
cgtgacgggcgattcggggcttacgtgacggacggagagactaatgtcaccattccgcgg
ggccagacgatcgaggagatcgacttcgagcaggcagttcagatgctcgccgataagcgt
gcgaagggtccggcgaaaaagacttccgctaaaaaggcttcagagaagaaaacgacggca
aagtccactgccgcaaagtcacgtgcgaccgccgctactaaaagttccgtgacgaaaaag
ccgagaaagactgctacaaccagagcagaagagacgaccgccaccgacgcggcaggcgcg
acacagtcgtga
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