Rickettsia typhi Wilmington: RT0162
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Entry
RT0162 CDS
T00193
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
rty
Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rty03032
]
RT0162 (hupA)
03036 Chromosome and associated proteins [BR:
rty03036
]
RT0162 (hupA)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0162 (hupA)
DNA replication proteins [BR:
rty03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RT0162 (hupA)
Chromosome and associated proteins [BR:
rty03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RT0162 (hupA)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RT0162 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AAU03646
UniProt:
Q68XJ6
LinkDB
All DBs
Position
202937..203236
Genome browser
AA seq
99 aa
AA seq
DB search
MNKTEFIAYMTEHCHNNKHAAHKTLTKADAEKALNLVIDSVISAIKSKHNVNLTGFGSFE
IHHRKAREGRNPKTGAKMTIDAYNQPTFRAGRKLKEACN
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaatttatagcatatatgactgaacattgtcataataataagcatgct
gcacataaaacattaacaaaagctgatgccgagaaagcacttaatttagttattgatagt
gtgattagtgcaataaagagcaagcataatgttaatcttacaggttttggttcattcgaa
atacatcatagaaaagcacgtgaagggcgtaatccaaaaactggagcaaaaatgacaata
gatgcttacaatcaacctacttttagagctggaagaaaattgaaagaagcatgtaattaa
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