Rickettsia typhi Wilmington: RT0196
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Entry
RT0196 CDS
T00193
Symbol
gyrA
Name
(GenBank) DNA gyrase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rty
Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rty03032
]
RT0196 (gyrA)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0196 (gyrA)
Enzymes [BR:
rty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RT0196 (gyrA)
DNA replication proteins [BR:
rty03032
]
Prokaryotic type
DNA Topoisomerases
RT0196 (gyrA)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RT0196 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AAU03680
UniProt:
Q68XG2
LinkDB
All DBs
Position
250064..252781
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AA seq
905 aa
AA seq
DB search
MTDKYSSNLVPVNIEDEMKASYLDYAMSVIVSRAIPDVRDGLKPVHRRIIYSMYEAGNHA
SKPYRKSARIVGDVMGKYHPHGDSAIYDSLVRMTQDFSLRLPLVDGQGNFGSMDGDAAAA
MRYTESRMSKVAHKLVEDIDKGTVSFNINYDGSEEEPSVLPAMFPNLLVNGSGGIAVGMA
TNIPPHNLGEIIDACCLYIDNNDIEILDLLEVVKGPDFPTGSMILGISGIRSAYLTGRGS
IIMRGKAEIENIGNSRQAIIITEIPYMVNKARLVEKIAEMVKEKRIEGISDLRDESNKNG
VRIFIELKKDVVAEVVLNQIYACTQLQTNFGVIMLALKDGLPKVMNLKEVIAAFVSFREV
VITNRTIYLLNKARDRAHILLGLAIAISNIDEIIYIIKASNDTNLAKQELMDRQWEVLDI
LPLIKLVDDKVMLNERGKLSFTEVQAKAILEMKLQRLTAMEKNKLEQDLKHLATEIAEYL
NILDSRTRLLEILKEELIKVKEEFAVPRLTAIEFGEFDQDIEDLIQREEMVVTVTLGGYI
KRVPLSSYRSQKRGGKGRSGLSMRDEDITMQVFVGSTHTPMLFFSNIGKVYSLKLYKLPL
SNPQGKGRPMVNILPLQENEHITNIMPLPENQDEWDHLNIMFATAKGNIRRSDLLDFKKI
QLNGKIAIRLDEDDKLIDVKPCKEDEHILLATKAGKALRFPVESLRIIKSRISDGVRGMK
LAKEDSVISMTVLKGINSTKEDRDAYLTVPWEKRLKIAKGEEFNLEALGVHLNADSILEM
ANSEEFILTVTENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDELML
ITNSGKLIRCKLESVRITGRNTSGVILFKLDDDEKVVSVSLIAETSESGEDSELVEDGLE
SAENM
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtgactgataaatattcttctaatttagtaccggtaaatatcgaagatgagatgaaagca
tcttatcttgattatgctatgagcgttatagtaagtagagctataccagatgttcgtgat
ggtttaaagcctgtgcatcgcagaattatctattccatgtatgaagccggtaatcatgct
agcaaaccttatagaaaatctgcacgaatagttggtgacgttatgggtaaataccatcct
catggtgatagtgctatttatgattcgttagtacgtatgactcaagatttttctttgcgt
ctgccgcttgtagatggacaaggtaatttcggctcaatggatggtgatgcagcggctgcg
atgagatatactgaatctcgcatgtctaaagttgcacataagcttgtagaggatattgat
aaaggaactgtcagttttaacattaattatgacggttctgaagaagagccatccgtacta
cctgcaatgtttcccaatttattggttaatggtagtggaggtattgcagttggtatggca
actaacattccgcctcataatcttggtgagattattgatgcgtgctgtttatatatagat
aataatgatatagaaatattagatttactagaagttgttaaaggaccagatttccctaca
ggatcaatgattttaggcattagtggtattagatctgcatatcttactggtagaggtagt
atcattatgcgcggtaaagctgagattgagaacatcggtaatagccgtcaagcaattatt
attactgaaataccgtatatggtcaataaagcaaggcttgttgaaaaaattgctgaaatg
gttaaggaaaaacgtatagaaggtataagtgatttacgcgatgaatcgaataaaaatggt
gtaaggatttttattgagttaaagaaagacgtagttgcagaagtagtcttaaatcaaata
tatgcatgtactcagctacaaactaactttggtgttattatgctcgctcttaaagacggg
ttaccgaaagtgatgaatttaaaagaagtaattgcagcttttgttagttttagagaagtg
gtaattactaatcgtactatatatttgctaaataaagcaagagatagagcacatatttta
ctagggttggctattgccattagtaatatagatgaaataatatatattattaaagcttca
aatgatacgaatttagctaaacaagaattaatggatagacagtgggaagtattagatatc
ttacctcttataaaattggttgatgataaagtaatgttaaatgagcgaggtaaattgagt
tttactgaggtacaagctaaagcaatcttagaaatgaagctgcaacgtctaactgctatg
gagaaaaacaagcttgaacaagatttaaaacacctcgctacggagattgccgaatatctt
aatatactcgactctcgtacaaggttacttgaaattttaaaagaagagctaattaaagtt
aaagaagaatttgcagttcctcgtcttactgcgattgaattcggtgagtttgatcaagat
atagaagatttaattcagcgtgaagaaatggtcgtaacagtaacgcttggtggttatatc
aaacgtgtacctttaagtagctatcgttcacaaaaacgtggaggtaagggtagatctggt
ctttcaatgcgagatgaggatattaccatgcaagtttttgtcggtagtactcatacgcca
atgttatttttctcaaatataggtaaggtttatagcttgaagctttataaattaccttta
agtaatccgcaaggtaagggtagaccaatggttaatatattaccattgcaagaaaatgaa
catattacaaatatcatgccgttaccagaaaatcaggatgagtgggatcatttaaatatt
atgttcgcaactgcaaaaggtaatatcagaagaagtgacttattagattttaaaaagatt
cagttaaatggtaaaattgctattaggcttgatgaagacgataaattaatagacgtaaaa
ccatgtaaagaagatgagcatattttacttgctaccaaagcaggtaaagctttaagattt
cctgttgaatctttgcgtattattaagagtcgtatttctgatggggtgcgcggtatgaag
cttgctaaagaggattctgtaatttctatgactgtacttaaaggcattaacagtacaaaa
gaggatagagatgcttatttaacagtaccatgggaaaaaaggcttaagatcgctaaaggt
gaggagtttaaccttgaagcattaggtgtacatttgaatgcagattcgattttagaaatg
gccaattcggaagaattcatcttgacagttacagagaacggttttggtaaaagaagctcg
gcatatggttatagaattactgatcgtggtggtagtggtataataaatatggatattaac
gataaaacaggtttagtcgttggtgtgatgccagttaaaatggatgatgagttaatgctg
atcacaaatagtggtaagttaattcgctgtaaacttgagtcggtacgtattacgggtcgt
aacactagtggtgtaattctgtttaaattagatgatgatgaaaaagtagtatctgtttct
ttaatagctgaaacttctgaaagcggagaagatagtgaattagtggaagatggattagag
agtgctgaaaatatgtag
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