Rickettsia typhi Wilmington: RT0401
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Entry
RT0401 CDS
T00193
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty00300
Lysine biosynthesis
rty00470
D-Amino acid metabolism
rty01100
Metabolic pathways
rty01110
Biosynthesis of secondary metabolites
rty01120
Microbial metabolism in diverse environments
rty01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RT0401 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RT0401 (dapF)
Enzymes [BR:
rty01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RT0401 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
S_layer_C
Fer2
Motif
Other DBs
NCBI-ProteinID:
AAU03878
UniProt:
Q68WW4
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All DBs
Position
510908..511720
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AA seq
270 aa
AA seq
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MINKINFVKMHGLGNDFVIVHKRDLATVCNLSQLAKNMADRHTGIGCDQCIIYEEYNNVY
TMIIYNIDGSNAKLCGNATRCLAKLIYLDTGKKDITIMVGKKKLLCNVEAANKISVNVGN
VSFNETWMPSRDRIWAFAERYMLDLKETMCVDIGNPHLIIFSKLEPQDQKIIGQKLQAKE
LFVDGVNVNFAEVKDNKIYLSVWERGAGLTLACGSGACGSFAAGLKLGFVHSPSTVVFKY
GNLIMQEEDGNIIMQGEATFVMRGEYYCEK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattaataaaattaactttgtaaaaatgcatggtcttggtaatgattttgtgattgtt
cataaacgggatttagccactgtatgcaatttatcgcaattagccaaaaatatggctgat
cgtcatacaggtattggttgtgatcagtgtattatttatgaagagtataataatgtttat
acaatgattatatacaacatagacggatctaatgctaaattatgcggtaatgctacacga
tgtttagcaaagttaatttatcttgatacaggaaagaaagatattacaataatggtaggc
aagaaaaaattgttatgtaatgtggaagctgcaaataagattagtgtgaatgtaggaaac
gtgagttttaatgaaacttggatgccaagccgtgatagaatttgggcatttgcagagcgt
tatatgcttgatttaaaagaaacgatgtgtgttgatataggtaatccacatttaattatt
tttagtaaattagaaccgcaagatcaaaaaattatcggtcaaaaattacaggctaaagaa
ttatttgtagatggagtaaatgtgaattttgctgaagtaaaagataataaaatttattta
tctgtttgggagcgaggagcagggttaacgcttgcttgcggtagtggagcttgcggtagt
tttgctgctggtttaaagcttgggtttgtccattcaccaagtacggtagtatttaagtac
ggtaatcttatcatgcaagaagaagatggtaatataataatgcaaggagaagcaaccttt
gtaatgcgtggagaatattattgtgagaaataa
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