Rickettsia typhi Wilmington: RT0489
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Entry
RT0489 CDS
T00193
Symbol
pnp
Name
(GenBank) Polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RT0489 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rty03019
]
RT0489 (pnp)
03016 Transfer RNA biogenesis [BR:
rty03016
]
RT0489 (pnp)
Enzymes [BR:
rty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RT0489 (pnp)
Messenger RNA biogenesis [BR:
rty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RT0489 (pnp)
Transfer RNA biogenesis [BR:
rty03016
]
Prokaryotic type
tRNA degradation factors
RT0489 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_DUF2096_C
OB_PDCD11
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAU03961
UniProt:
Q68WN1
LinkDB
All DBs
Position
624535..626772
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AA seq
745 aa
AA seq
DB search
MFNEITKSVIWNRQVLEISTGKIARQADAAVTVKMGNSILLCTCVVANKVKDGIGFFPLT
INYREMAYSAGKIPGGFLKREGKASDKEILVSRLIDRPIRPLFHQAFIHETHITCSVLSY
DPETPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTKDSVMMVESEAHLLSEEKMLEAIKFGFENFQTVIKLIKEFAKEAKKPKFEMQDLYPSS
LKKEIGKLFAKEIEQAFAIKSKQERNANLALIHEKVLTHFVCDIENKKYNNYQIESTLKA
ISADILRNKILEQNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLIKEGDKFAILS
DIIGDEDYFGDMDFKVAGTSKGITALQMDIKISGIDFKIIQVALEQARHGRLHILEQMNK
IISKPNSELSKNAPSSTTIKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSVYA
ADRDKIKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISETRI
DKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNACKDHSLNNPKQKNNVKEDSEPEQRRDA
SKKRTWNEDNNTEMSEVITERKYFT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaaataactaagagcgtgatatggaataggcaagtgcttgagattagtaca
ggtaaaatagcaagacaagctgatgcagcagttactgtaaaaatgggtaattcaatttta
ttatgtacgtgtgtagtagcgaacaaagtgaaagatggtataggatttttccctttaaca
attaattatagagaaatggcatattctgctggtaagataccaggggggtttttaaaacgt
gaagggaaagcatcagataaagaaattttagtatctcgtttaatagatagaccaattaga
ccattatttcatcaagcttttatacatgaaacgcatataacttgcagtgttctttcatat
gatcctgaaactcctgtagatatacttgcaattataggtgcatctgctgcacttagcata
tcccctgccccttatctagaaatagttgctgcaagtaaagtaggtttaattaatggtgaa
tttgttttaaatcctacacttgaattattaaaaacaagtcagcttgatttagtagtagca
ggaacaaaagattcagtgatgatggttgaatcagaagcacatttactctctgaagaaaaa
atgttagaagcaataaaatttggatttgaaaatttccagacagtcatcaagctaattaaa
gaattcgcgaaagaagctaaaaagcctaaattcgaaatgcaagatttatatccttcttca
ttaaagaaagaaattgggaaattatttgcaaaagaaattgaacaagcttttgcgataaaa
tctaagcaggaacgtaatgctaatttagctttaatacatgaaaaagttcttacacatttt
gtatgcgatatagaaaataaaaaatataataattatcaaattgaatcaactttaaaagct
atttcagcagatatattacgtaataaaattttagaacaaaatatacgtattgatggaaga
agcacaacagatataagacaaattgcttgtgaagtaggtttattaccatcagcacacgga
tcagctttatttactagaggtgaaacgcaaagtttagttagtactacatttgggactagt
ttagatgagcaaatagttgacagtttagaaggtgaatataaagaacgttttatgctaaat
tatatattcccgccctattctgtcaatgaagcaatgccaatgaaagctcctagtcgtcgt
gaagttggacacggtaaacttgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactactgagtctaacggttcttcttcg
atggcaactgtttgcggtagttctcttgctttaatgtatgctggcgtgccaataaaagca
ccggttgctggtattgctatgggtcttattaaggaaggtgataaatttgctatattatcg
gatattatcggtgatgaagattatttcggtgatatggattttaaagttgcaggcactagt
aaagggattactgcattacaaatggatattaaaatatcaggaatagattttaaaataatc
caagtagctttagagcaagcacgacacggtcgtttgcatatactggagcaaatgaataaa
attatcagtaaaccaaatagtgaactaagtaaaaacgccccttcttctactactataaaa
atagacaaagataaaattaaagatattatagggccaggtggtaaaataataaaggaaatt
tgtgaaactagtaatgcgaaaatagatataagcgatgacggcacggtttctgtttatgct
gcagatagggataagataaaagttgcattggataaaattaaagcgattgctgttgagcct
gaaattggtgaaatatttaacggtacggtaatgaaagttttagattctggtgcttttatt
aattatttagggaataaagacggctttgttcatattagtgaaatttcagaaacaagaata
gacaaggttagcagtgttttaaaacaaggtgatatagtaaaagttaagctaataggcttt
gataataaaggtaaagcaaaactaactattaaaaatgcttgcaaagatcactctttaaat
aatccaaaacaaaaaaataatgttaaagaagattcagaacctgagcagcgacgtgatgct
agtaaaaaacgtacttggaatgaagataataatactgaaatgtctgaagtaattacagaa
cgtaaatattttacataa
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