Rickettsia typhi Wilmington: RT0547
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Entry
RT0547 CDS
T00193
Symbol
fadB
Name
(GenBank) Beta-hydroxyacyl dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty00071
Fatty acid degradation
rty00280
Valine, leucine and isoleucine degradation
rty00310
Lysine degradation
rty00362
Benzoate degradation
rty00380
Tryptophan metabolism
rty00640
Propanoate metabolism
rty00650
Butanoate metabolism
rty00907
Pinene, camphor and geraniol degradation
rty00930
Caprolactam degradation
rty01100
Metabolic pathways
rty01110
Biosynthesis of secondary metabolites
rty01120
Microbial metabolism in diverse environments
rty01200
Carbon metabolism
rty01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RT0547 (fadB)
00650 Butanoate metabolism
RT0547 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RT0547 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RT0547 (fadB)
00310 Lysine degradation
RT0547 (fadB)
00380 Tryptophan metabolism
RT0547 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RT0547 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RT0547 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RT0547 (fadB)
00930 Caprolactam degradation
RT0547 (fadB)
Enzymes [BR:
rty01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RT0547 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RT0547 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RT0547 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_2
ECH_1
NAD_binding_2
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
DAO
ApbA
NAD_binding_8
Pyr_redox_2
ATP12
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AAU04015
UniProt:
Q68WH7
LinkDB
All DBs
Position
complement(705855..708017)
Genome browser
AA seq
720 aa
AA seq
DB search
MQNEIKKVCVIGAGVMGSGIAALIANSSHRVVLLDILDKDSNDPNKIVKNAVKNLHRQKL
PPLSYPDKVNFITIGNLEHDLDLIKECNLVIEVIVEKLDIKHQLYNKIIPYLKEDTIIAS
NTSTLPLKKLKENLPNNIKSRFIITHFFNPPRYMELVELIIDNTIKDEVIEKISVFLTKI
LGKTIIKCNDTPGFIANRVGCFLLELVAHKAIAQNLDFVTIDQIFSRCLGLPNTGIFGLY
DLIGHDVMKLISSSLLSALPKSDDYHRIYFNTKVFDKMIEHNLIGRKGEGGFYRLSVSNG
KKIKEVINISDLSYHPVQKVDISFNNLDELLASDSIYSKFFSEIITEFYIYLTSLVPSVT
NNIYDIDATMKLGYSWHYGPFELLTIAVKNGWNSIIKNADLMNISLPKYLASKEYQKIDK
QKFNSKKDFLQESTIVLANDSANLIHYCENLIFVITTKMNTLNHNVFYLLQEAVSKAENY
GKNLYIFPQGNNFSAGADLKLILSYIQDGNFDNLENLLKLGQQTMRYLKYSSVHIISCAR
GVALGGGCELLLNSSYIVANQELNAGLIEFGVGLIPGWSGVTEMFARSNGDKTKLIRNIK
NIIEQNKTSSADYFKADYDVSNMQVNMNKHYILDEALKLNVSNKIVSIPHKIALPKINIV
SEIDTSKYNDLQNKVLNKFQNIIDKHNEISEAELLTYEREIFLELAKEPQTIEKLHAIVG
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgaaataaaaaaagtttgtgttattggtgcaggagttatggggtcaggaatt
gcagcgttaattgctaattcttctcaccgagtagttttgcttgatattctcgataaagat
tctaatgatcctaataaaatagtaaaaaatgctgtaaagaatttgcatagacaaaaactt
cctccattatcttatccagataaagtaaatttcattacaataggtaatttagaacatgat
ttagatttaattaaagaatgtaatttagtaattgaagttattgttgagaagttagacatc
aaacatcaattatataataaaattataccttatcttaaagaagacacaattattgcttct
aatacctctacattgccactgaaaaaactcaaagagaatttaccgaataatataaagtcc
aggttcattattacgcatttctttaatccaccgagatatatggagttggttgaattaatt
atagacaatacaatcaaggatgaggtaatagagaaaatatcagtgttcttaacaaaaatt
cttggtaaaactataataaaatgtaatgatacacctggttttattgctaatagagtaggg
tgttttttacttgagttagtagcccacaaagcgatagctcaaaatcttgattttgttaca
atcgatcaaatatttagtagatgtttaggtttgccaaataccggaatttttggcttatat
gatttaataggtcatgacgtaatgaagttaatatcaagttcattactttctgctctgcct
aaaagtgatgattatcataggatatattttaataccaaagtttttgataagatgatagag
cataatttaattggacgtaaaggtgagggtggattttatcgtttatctgtatcaaatggt
aaaaagattaaagaagttattaatataagtgatttatcatatcaccctgttcagaaagta
gatatttcatttaataatcttgatgagttgttagctagcgattcaatttatagcaagttt
tttagtgagattatcacagaattttatatttatttaacaagcttagtaccatctgtgact
aataatatctacgatattgatgctactatgaagcttggttatagttggcattatggaccg
tttgagttattgactatagctgttaaaaatggatggaattcgataattaaaaatgctgat
ttaatgaatatttcactacctaaatatttagctagtaaagaatatcaaaaaattgataaa
caaaaatttaattctaaaaaagattttttacaagaaagtacaatagtattagcaaatgat
tctgcaaatttaatacattattgtgaaaatttaatatttgttattactacgaaaatgaat
actttgaatcataatgtgttttatttattgcaagaagcagtaagtaaagcagaaaattat
ggaaaaaatctttatattttcccacaaggaaataatttttctgctggtgcggatttaaag
cttattctttcttatattcaagatgggaattttgataatttagagaatttattaaagctt
ggacaacaaacaatgcgttatttaaaatattcctctgtacatattattagctgtgctcgt
ggtgttgcgcttgggggtgggtgtgaacttctattaaactcaagctatattgttgcaaat
caggagcttaacgccggacttatagagtttggagtaggtttaataccaggatggagtggt
gttacagaaatgtttgctagaagtaatggagataaaactaaattaattagaaatattaag
aatattatagagcaaaataaaacaagttcagctgattattttaaagcagattatgatgta
agtaatatgcaagtcaatatgaacaagcattatattttagatgaagctttgaaactaaac
gtatctaacaaaatagtatcaatacctcataaaattgctttacctaaaattaatatagta
agtgaaatagatacatccaaatataatgatctacaaaataaggtacttaataaattccag
aatattattgataaacataatgaaataagtgaagcagaattacttacatatgagcgtgaa
atatttttagaacttgcaaaagaaccgcagactatagagaaattgcacgcgattgtgggg
taa
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