Rickettsia typhi Wilmington: RT0569
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Entry
RT0569 CDS
T00193
Symbol
gyrB
Name
(GenBank) DNA gyrase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rty
Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rty03032
]
RT0569 (gyrB)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0569 (gyrB)
Enzymes [BR:
rty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RT0569 (gyrB)
DNA replication proteins [BR:
rty03032
]
Prokaryotic type
DNA Topoisomerases
RT0569 (gyrB)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RT0569 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Peptidase_M75
Motif
Other DBs
NCBI-ProteinID:
AAU04036
UniProt:
Q68WF6
LinkDB
All DBs
Position
complement(736101..738524)
Genome browser
AA seq
807 aa
AA seq
DB search
MSGIEEKCNESSYSADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNSIDEAL
AGYCDLIRVTLNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQHSYKIS
GGLHGVGVSVVNALSEWLELRIWRNNKEYFIRFNNGITEAPLSIVKENIDKKGTEVTFFP
SVGIFTNIEFDFVTIEHRLRELAFLNSGVKILLIDNRFEEVKKVEFFYTGGIEAYVQYID
RAKHAIHPCIVVNTEHVESGISLELAIHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKTKHDFSGEDTREGICCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPIEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLSSEQIGT
LITALGISVEREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIA
QPPLYKVKSGASELYLKNEQALQNYLIKSTINDTKLILDGQEQLIGYNLEDLINKVVQFN
CLLDRASKKFNRSITEILAINDLFNKKIFEPESGSRLQKALDVLNNLEESPDKTNLQVLK
HENRIEFFHFSRGLKNTKILLKEQLELFEFVEISQFALSIFDIFSKRLKLIVKGKEFDVV
TPSQLLNTIIECGKKGITIQRFKGLGEMNSDQLWDTTLDPTKRTLLQVRVSEVDEAEGIF
STLMGDVVEPRRLFIQANALNVMNLDI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaattgaagaaaaatgtaatgaatcatcatatagtgctgattctataaaggtg
ttaaaaggtcttgaagcagtcagaaaaagaccagggatgtatataggtgatgttggagat
ggatctggtctacatcatatgatttatgaagtagttgacaattctatcgatgaagcgctt
gctggttattgtgatttaatacgagtaacattaaataaaaatggttcggtaactgtatct
gataatggacgaggtatacctgttgagattcatgaagaagaagggatatcggccgctgaa
gtgattatgactcagcttcatgcaggtggtaagtttgatcagcactcctacaagatttca
ggtggtctgcatggtgttggtgtatcggtagtaaatgcactttctgagtggcttgagttg
cgtatttggcgtaataataaagaatattttattagatttaataatggtataactgaagct
ccactttcaattgtcaaagaaaatattgataaaaaaggtacggaagttacttttttccca
tctgtaggaatattcactaatatagaatttgattttgttactatagagcatcgtctgcga
gaacttgcttttttaaattcaggcgtaaagattctactcattgataatcgttttgaagaa
gttaaaaaagtagagtttttttatacaggtggtatagaagcttatgtacaatacatagat
agagcaaagcatgctatccatccatgtatagtagttaatactgagcatgttgagtccggt
ataagccttgagcttgcaattcattggaacgattcttatcatgagaatattctatgtttt
actaataatattaggcagcgtgatggtgggactcatcttagtgctttcaaatcagcgatc
acacgtgttatcacttcttatctagatactacaggtcttaataaaaaaactaaacatgat
tttagcggtgaagatactagagaagggatttgttgtgtattatctgttaaagttcctgat
cctaaattttcttctcaaacaaaagataagctagtaagttctgaagtgcgacctgttgta
gagaatgccgtttatacaaaggttcttgagtggtttgaagaacatcctattgaagctaag
gcaattatagctaagattatggaagcggccaatgctcgtgaagccgctagaaaagcaaga
gaacttactagaagaaaatcagctttagaagtctcaaatttaccaggtaaacttgcagat
tgccatgcaaaagatcctgctatttcagaattgtttattgttgagggggactctgcaggt
ggtactgcaaagcagggtagggatagcaaaattcaggctatattgcctttgcgtggtaaa
attttaaatgttgaacgagcaaggtttgataaaatgcttagttcggagcaaatcggtaca
ttaattacagctcttgggattagtgttgaacgagaattttctttagaaaagcttagatac
cataaagttattattatgaccgatgctgatgttgatggttcgcatattagaactttgtta
ctcacatttttttatcgtcatatgccagagctcataaataaaggctatctatatatagca
cagccaccactttataaggtaaaaagtggtgcatctgagctttatttaaagaatgaacaa
gctttgcaaaattatttaataaaatcaactattaatgatacaaaattaattctagacggt
caagagcagttaataggttataatttagaagatctaattaataaagtagttcagtttaac
tgtttgcttgatcgtgctagtaaaaaatttaatcgctcaattactgaaattcttgcaatt
aatgacttatttaataaaaaaatatttgagcctgaaagtggttcaaggcttcaaaaagct
ttagatgttttaaataatttagaagaatcgccagataaaactaatttgcaagtgttaaaa
catgagaatagaatagaattcttccattttagtagaggtttaaaaaacactaaaatattg
ttgaaagagcagttagaattatttgaatttgtagaaatatcacagtttgctttatcaatt
tttgatatatttagtaagcgattaaagcttatagtaaaaggtaaagaatttgatgttgta
acaccaagtcagttgttaaatactattatagaatgcggtaaaaaaggaatcactattcag
cgttttaaaggtcttggagagatgaattctgatcagctgtgggacaccactcttgatcct
acaaagcgaactttgcttcaagtaagagtttctgaagtagatgaagccgaagggattttt
tctactttaatgggtgatgttgttgaacctcgtagattatttatccaagctaatgcttta
aatgttatgaatttagatatataa
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