Rickettsia typhi Wilmington: RT0617
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Entry
RT0617 CDS
T00193
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RT0617 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rty03019
]
RT0617 (groEL)
03110 Chaperones and folding catalysts [BR:
rty03110
]
RT0617 (groEL)
03029 Mitochondrial biogenesis [BR:
rty03029
]
RT0617 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rty04147
]
RT0617 (groEL)
Enzymes [BR:
rty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RT0617 (groEL)
Messenger RNA biogenesis [BR:
rty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RT0617 (groEL)
Chaperones and folding catalysts [BR:
rty03110
]
Heat shock proteins
HSP60 / Chaperonin
RT0617 (groEL)
Mitochondrial biogenesis [BR:
rty03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RT0617 (groEL)
Exosome [BR:
rty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RT0617 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RT0617 (groEL)
Exosomal proteins of breast cancer cells
RT0617 (groEL)
Exosomal proteins of colorectal cancer cells
RT0617 (groEL)
Exosomal proteins of bladder cancer cells
RT0617 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_DEC_PhiTE
CbiA
Motif
Other DBs
NCBI-ProteinID:
AAU04081
UniProt:
O85754
LinkDB
All DBs
Position
complement(806356..808008)
Genome browser
AA seq
550 aa
AA seq
DB search
MTTKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGAPKITKDGVTVAKSI
ELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNKLVAAGYNPMDLKRGM
DLAVNAVVEEIKRSSKKINSQEEIAQVGTISSNGDKEIGEKIAKAMEEVGKEGVITVEEA
KNFSFDVEVVKGMMFDRGYLSPYFVTNSEKMVAELENPFILLFEKKLSNLQPMLPILEAV
VQSQRPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMMEDIAILTKGEL
ITEDLGMKLENVNIKNLGTAKRVTISKENTVIVDGNGDKKNIEDRVLQIKSQIAETTSDY
DKEKLQERLAKLSGGVAVLKVGGATEVEVKERKDRVEDALAATRAAVEEGVVAGGGVTLL
HASQTLTKLKVENKDQQAGIEIVIEALKDPLKQIVKNAGENGGVVVGKLLEHNDKNYGFN
AQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEEPMPMRGGMG
GMGGMGGMDF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaacttattaaacacggttcaaaagcccgtgaacaaatgctcgaaggtatt
gatatacttgcagatgcagtaaaagtgactttaggtccaaaaggtagaaatgtacttatc
gaacaatcatttggtgcaccgaaaattacaaaagatggtgtgactgttgcaaaatcgatt
gagttaaaagataaaattagaaatgcaggagctcagctattaaaatcagctgctacaaaa
gctgcagaggtagcaggtgatggtactactactgctacggtacttgcgagagctttggct
cgtgaaggtaataagttggttgcagcaggctataatcctatggatttaaagcgtggtatg
gatttagcagtaaatgcagtagtagaagaaattaaaagatctagtaaaaaaatcaatagc
caagaagaaattgcgcaagttgggactatatcttcaaatggtgataaagaaatcggtgaa
aaaattgctaaggcaatggaggaagtcggtaaagaaggtgtgatcaccgttgaagaggca
aagaattttagttttgatgttgaagttgtcaaaggtatgatgtttgataggggttattta
tcgccatattttgtaacgaattctgaaaaaatggttgctgagcttgaaaatccttttatc
ttactatttgaaaagaagttatcaaatttacaaccaatgttgcctatacttgaggctgta
gtacaatcacaacgtccgttattaattattgctgaggatgttgagggtgaagcacttgcg
acgcttgtagtcaatagattacgtggtggtttgaaagttgcagcagtaaaagctcctggt
tttggtgatagaagaaaagcaatgatggaagatattgctatcctcactaaaggtgaactt
attactgaagatttgggtatgaagcttgaaaatgttaatattaaaaatctaggtacagca
aaaagagttacaatttctaaagaaaatactgtaattgttgatggtaacggtgataagaaa
aatattgaggatagagtattacaaattaaatctcaaatagctgaaactacttctgattat
gataaagaaaaacttcaagagcgtttagctaaactttccggaggagttgcagtattaaag
gttggtggtgctacagaagttgaagtgaaagagcgtaaggatcgcgttgaagatgcgctt
gctgctaccagagcagcagttgaggaaggtgttgttgctgggggcggtgtaacgttactg
catgcatcacaaactttaacaaagcttaaagtagagaataaagatcagcaagctggaatt
gaaatagtaatagaagctttaaaagatccactaaaacaaattgtaaaaaatgccggtgaa
aacggtggtgtagtagttggtaaattactggaacataatgataaaaattatggctttaat
gctcaagatatgcaatatgttgatatgattaaagcaggcattattgatccggctaaagta
gtacgtactgcacttcaagatgctgcttctgttgcttccttaattattaccacagaaact
ttaattgtggatgaaccttctgataaagaagaaccaatgccaatgcgtggcggcatgggt
ggcatgggtggtatgggtggtatggacttctaa
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