Rickettsia typhi Wilmington: RT0627
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Entry
RT0627 CDS
T00193
Symbol
rpoA
Name
(GenBank) RNA nucleotidyltransferase (DNA-directed)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RT0627 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rty03021
]
RT0627 (rpoA)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0627 (rpoA)
Enzymes [BR:
rty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RT0627 (rpoA)
Transcription machinery [BR:
rty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RT0627 (rpoA)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RT0627 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
AAU04090
UniProt:
Q68WA2
LinkDB
All DBs
Position
complement(815371..816393)
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AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNRVTYENFPETNNKAKIIVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVQEDVSEVILNIKGIEVKMHVSEKRIMKLKATGPCVVTAGMI
DTGHDVEILNPNHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIIFVETNGDVLPEMAVGLAARILQEQLQLFIAFEEQEE
DKQVKTDSLPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcattaagtaaaaattggaatactttaattaagccgaatagagtcacgtatgaa
aatttccctgaaacaaataataaagctaaaattatagttgagcctttagaaagaggtttt
ggtttaactcttggtaatgctatgagaagagtattactatcttctttacaaggagctgct
attacttctataaagattcctgctatagagcacgaattttcttctatacctggtgtacaa
gaagatgtatcagaagtgattttaaacattaagggtattgaagtaaaaatgcatgtttcg
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacagcaggtatgatt
gatacagggcatgatgtagaaatactgaatccaaatcatgtaatttgtaatttagctaag
aataagcagcttgaaatggaattaacatgtaaagttggtaaagggtatgtacttagcaca
aatagctatgaggataacttacctattggtgaaatcgctatagatgctttatttaaccca
gtaaagagtgttacttataaggttgaaaatactagggttggtcaagttactgactatgat
aagttaattatatttgtagaaactaatggtgatgtattacctgaaatggctgtagggtta
gcggctcgtattttacaagagcaattacaattatttattgcttttgaagagcaagaagaa
gataagcaagtaaaaactgattctttaccattttcgccatatttacttaagagagttgat
gaattggaattatcagtgagatctgcaaattgtttaaagaatgataatataatatatata
ggagatctagtaaaaagaacggaatctgatatgttgagaactccaaattttggtagaaaa
tctttaaatgagattaaagaaatattggcaaagtttaatttaaggttcggtatggatgtg
ccagattggccaccggaaaatattcaagaattatctaaacgttatgaagattcttataat
taa
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