Rickettsia typhi Wilmington: RT0718
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Entry
RT0718 CDS
T00193
Symbol
dnaQ
Name
(GenBank) DNA nucleotidyltransferase (DNA-directed)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03030
DNA replication
rty03430
Mismatch repair
rty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT0718 (dnaQ)
03430 Mismatch repair
RT0718 (dnaQ)
03440 Homologous recombination
RT0718 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rty03032
]
RT0718 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0718 (dnaQ)
Enzymes [BR:
rty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT0718 (dnaQ)
DNA replication proteins [BR:
rty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT0718 (dnaQ)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT0718 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAU04176
UniProt:
Q68W16
LinkDB
All DBs
Position
912298..912987
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AA seq
229 aa
AA seq
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MSSLREIILDTETTGLDPQQGHRIIEIGAIEMVNKVLTGKHFHCYINPERDMPFEAYKIH
GISGEFLKDKPLFHTIANDFLKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTN
TIDTLVMARSMFPGARYSLDALCKRFKVDNSGRQLHGALKDAALLAEVYVALTGGRQSTF
KMIDKPNEINNLTVKCIEVQKIKRSIVVKPTKEELQKHKEFIDKILIQA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtttaagagaaataattttagatactgaaactacgggacttgatccgcaacaa
ggtcatcgcatcattgagatcggtgcaattgagatggtgaataaggtattaacaggcaag
cattttcattgttatattaatcctgaacgcgatatgcctttcgaagcttataagattcac
ggtatctcaggagaatttttaaaagataaacctctgtttcatacaatagccaatgatttt
ttaaagtttatagcagatagtacacttattattcataatgctcctttcgatattaaattt
ctaaatcatgaattatctttattaaagagaaccgaaattaaatttttggaactaacgaat
actatagatactctcgttatggcaaggagtatgtttcctggagcaagatatagtcttgat
gcattatgtaaaagatttaaagttgataattcaggtcggcaacttcatggagctttaaaa
gatgcagcattacttgcagaagtgtatgtggcactcacaggaggtagacaatctactttt
aagatgattgataaacctaatgaaataaacaacttaacagttaagtgtatagaggttcag
aaaataaaaagaagtattgtggttaagcctactaaagaagaattacaaaaacataaagag
ttcatagataagattttaatacaggcttaa
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