Rickettsia typhi Wilmington: RT0719
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Entry
RT0719 CDS
T00193
Name
(GenBank) ATP-dependent helicase/nuclease
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rty
Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0719
Enzymes [BR:
rty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RT0719
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RT0719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Mob1_phocein
Motif
Other DBs
NCBI-ProteinID:
AAU04177
UniProt:
Q68W15
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All DBs
Position
913839..916310
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AA seq
823 aa
AA seq
DB search
MSNLQQQASNPNTSVWVSASAGTGKTKILIDRFLRLLITGTEPTNILCLTFTNAAAIEMQ
ARINSKLKHLALCDTEKLANELFLMSGNKPLAQEIENTKTLYYKLLNSHEPLNIYTIHAF
CQKILKTFPLEAGITPEFKILEETKLQDIFLKIKNEIYLSDEHNKLIQILLNRFHEMTLQ
DIFTEIIEQKIKFKKLFINKQIPKQISNKRFALKQLNNIYAKVESLFTAYDLEIEPKKLF
FTKDGEKRKRLLSKELTKKYPQLLIELEKITFKIHHLDELRRIEELEYHTNLLTKLAYII
LKKYDSYKEENNLLDYDDLIYYTEKLLNNKTTHEWLFHKLENEINHILIDEAQDTSTTQW
NIITTLITKFNAAEKPNNSIFIVGDEKQSIFRFQGANLHNFNLINEQLKINLTSTNKKFK
NITLEYSYRSCPEILQFTHNVLNNIKYNYPNLFLADNPLISSLRIHQGSVTVWPLVTNNK
QKEFFWILPEDDKNAKSAADLLIEKIVNFIKEKIESKKILPSTASQISEKDFMILVRKRD
KFSQNLIKELNKAKLKVEISDRINLKENLPILDLIAAAKFVLLPDDDLNLACLLKSPIIG
ISEQKLYTLLVNKNDHTLWEVLSTHTDIYNKLDSIIKIYKIASAEDFFDLVVNRLNLRAI
YGNNNDDMINELLTLSKDYANAIDNSLQGFIAWFENNEIYIKRDMEHSDKIRVMTVHGSK
GLEAPFVILCDSTTLPIRNNKFIWDDNGQMFFSLNAEDTPAFLQELKESEKLKDLQEYMR
LLYVAMTRAQDQLIICGFSNKDNVPENCWHKIATQTFNQLLNY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctacaacaacaggcatccaatcctaatacttctgtttgggtatcggcatca
gcaggtactggtaaaacaaaaatactaatcgatcgattcttgcgtctgttaataacaggt
acagaacctacaaatattttatgtcttacttttactaatgctgcagcaatagaaatgcaa
gcacgaattaatagcaaacttaaacatctagcgctttgtgatacagaaaaattagcaaat
gaactctttttaatgagcggcaataaaccgttagcacaagaaatagaaaacacaaaaact
ttatactataaattattaaatagccatgaacctttaaatatctatacaattcatgctttt
tgtcaaaaaattcttaaaacttttccattagaagcaggcataacaccagaatttaaaatt
cttgaagaaactaaattacaagatatcttcctaaagatcaaaaatgaaatctacttaagc
gatgagcataataaattaattcaaattttgcttaaccgatttcatgaaatgacactacaa
gatatttttactgaaatcattgagcagaaaattaaattcaaaaaattatttataaataag
caaattcctaaacaaatatctaataaaagattcgcgttaaagcaattaaataatatatat
gctaaagtagaaagtttatttacagcatatgacttagaaatagaaccaaaaaagctattt
tttaccaaagatggggaaaaacgtaaaaggcttttatcaaaagaattaacaaaaaaatat
cctcaattattgatagagctagaaaaaattacctttaaaattcatcatttggatgagttg
cgtcgtatagaggaactagaatatcatacaaatttactgactaaacttgcgtatattatt
ttaaaaaaatatgattcatataaagaagaaaataatttactcgattacgatgatctaatt
tactacaccgaaaaattactcaataataaaactacgcatgagtggttgtttcacaaactt
gagaatgagataaatcatatccttattgatgaagcgcaagatacaagcacgacacagtgg
aatattatcactactttaataacaaagtttaatgcggcagagaaaccaaataatagtatt
tttatagttggtgatgaaaaacagtctatctttagatttcaaggagctaatcttcacaat
ttcaacttaataaatgagcaactaaaaataaaccttacaagcactaataagaaattcaaa
aatattacacttgaatattcatatagatcatgtccagagattttacaatttactcacaat
gttttgaacaatataaaatataactacccgaatttattccttgctgacaatcctttaata
tcatcattacgtatacatcaaggtagtgtaacagtttggcccttagtaacaaataacaaa
caaaaagagtttttttggatattgcctgaagatgataaaaatgctaaatctgctgccgat
ttactgatagaaaaaatcgtgaatttcataaaagagaaaatagaaagtaaaaaaatattg
ccgtctactgcaagccaaatatcagaaaaagattttatgatattagtacggaaacgagac
aaatttagtcaaaatctaattaaagagcttaataaagctaagcttaaagttgagataagc
gatagaattaatctgaaagaaaatctacctatactagatttaattgcagcagccaaattt
gtgttattacctgatgatgatttaaatcttgcttgcttactcaaatcaccaattattgga
ataagtgagcaaaaattatacactcttcttgtaaataaaaatgatcatactttatgggaa
gtactttctacacatacagatatctataataagttagattccataattaaaatttataaa
atagcatctgcagaagacttttttgatttggttgtgaatagattaaatttacgagcgatt
tacggtaataataacgatgatatgataaatgagctattaacattaagtaaagactatgca
aatgctatagataattcactccaaggttttattgcttggtttgaaaataacgagatctat
ataaaacgtgatatggaacattcagataaaataagagtaatgacagtccacggatctaaa
gggcttgaagcaccatttgtgatattatgtgattctactactttacctatcagaaacaat
aaatttatttgggatgataatggtcaaatgtttttctctctgaatgctgaagatactcct
gcatttttacaagaactaaaagaatctgaaaaactgaaagacttacaggaatatatgaga
ttactctatgttgcaatgactagagcacaagatcaacttattatatgcggttttagtaat
aaagataacgtacctgaaaattgttggcataaaatagctacacaaactttcaatcaattg
cttaattattag
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