Rickettsia typhi Wilmington: RT0855
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Entry
RT0855 CDS
T00193
Symbol
dnaX
Name
(GenBank) DNA nucleotidyltransferase (DNA-directed)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03030
DNA replication
rty03430
Mismatch repair
rty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT0855 (dnaX)
03430 Mismatch repair
RT0855 (dnaX)
03440 Homologous recombination
RT0855 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rty03032
]
RT0855 (dnaX)
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0855 (dnaX)
Enzymes [BR:
rty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT0855 (dnaX)
DNA replication proteins [BR:
rty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT0855 (dnaX)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT0855 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_14
RuvB_N
AAA_5
AAA_30
AAA_19
AAA_18
ResIII
AAA_assoc_2
AAA_16
TIP49
RNA_helicase
Viral_helicase1
Rad17
nSTAND3
AAA_17
Ribosomal_S13
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AAU04308
UniProt:
Q68VP7
LinkDB
All DBs
Position
1090425..1091627
Genome browser
AA seq
400 aa
AA seq
DB search
MLENSSNQYIPFARKYRPNNFTELQGQEVLVKILSYTILNDRLVGGYLLTGIRGVGKTTS
ARIIAKAVNCSALITENMTIKTCEKCTNCVSFNNHNHPDIIEIDAASKTSIDDIRRIIES
AEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHVIFIFATTEVQKVPSTIISRC
QRYDLRRLSFEEIFKLLKYITKQENLIADIEALRIIAHKSEGSARDAVSILDQAASMSAK
SDNIISSQIINQMLGLVDASFILEFIEKIISKETEKAINLINKLYYRFSVNLETFIQSVA
DFIAYLNKVKILPNYSLPIYESFNYRTKSILAKISLAHLSILWQIYNKGVTEIKISYNQL
IETEMLVIKSIYSTSLPLLNDSNANIMNADNSGIKKNLKF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaaaattcatctaatcaatatattccttttgcaaggaaatatcgtcctaataat
tttactgaactgcaagggcaagaagtactagtaaaaattttaagctatactattttaaac
gatagactagtcggaggttatcttttaactggtattagaggtgttggcaaaactacctca
gctcgtattattgctaaagccgtaaattgttctgccttaattactgaaaatatgactatt
aaaacatgtgaaaaatgcacaaattgtgtcagttttaataatcataatcacccagatata
attgaaattgacgcagcaagtaaaactagcatagatgatatacgtagaattatagaatct
gctgaatataaacctctacaaggtaaacataaaatctttattattgatgaagtgcatatg
ctctctaaaggagcatttaacgcacttcttaagactttagaagaaccaccacctcacgta
atatttatttttgcaacaactgaagtacaaaaggtaccttcaactattatctcaagatgt
caacgttatgatttaagacgtttaagttttgaagaaatctttaagctacttaaatatata
actaagcaagaaaatttaatagcagatatagaagcattaagaattatagctcataagtct
gaaggttcagcacgtgatgcagtgtctattttagatcaagcagctagtatgtctgcgaaa
tctgataatataattagttctcaaataattaatcaaatgcttggacttgttgatgcttca
tttatattagaatttatagaaaaaataattagtaaagaaacagaaaaagctataaattta
ataaataagctttattatcgtttttcggttaatcttgaaacttttatacaatcagtagca
gattttattgcttatcttaacaaagtaaaaatattacctaattatagtctaccaatatat
gaatcatttaattataggactaaaagcatattagctaaaatcagtttagcacacttatca
atcttatggcaaatatataataagggagtcacagaaataaaaatttcctataatcaacta
atagagacggaaatgttagttataaaatctatatattcaacgtcactgccgctacttaat
gattctaatgctaatataatgaatgcagataattcaggaataaaaaaaaatttgaaattt
tag
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