Ruegeria sp. AD91A: D1823_01635
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Entry
D1823_01635 CDS
T05627
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rua
Ruegeria sp. AD91A
Pathway
rua03420
Nucleotide excision repair
rua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1823_01635
03430 Mismatch repair
D1823_01635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rua03400
]
D1823_01635
Enzymes [BR:
rua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1823_01635
DNA repair and recombination proteins [BR:
rua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1823_01635
MMR (mismatch excision repair)
Other MMR factors
D1823_01635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXT25410
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All DBs
Position
317808..320414
Genome browser
AA seq
868 aa
AA seq
DB search
MSSFDEMGAFEGASLSARAMAARPSPYLDELNPAQRDAVERLDGPVLMLAGAGTGKTKAL
TARIAHLLNTARARPNEILSVTFTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLL
RRHAELVDLKSNFTILDKDDQIRLLKQLVQAANIDDKRWPARMLAGIIDDWKNRALTPDK
VPTADAGAYNNKGVELYAQYQTRLRELNAVDFGDLLLHMVTIFQTHQDVLEQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAYVV
RLEQNYRSTPHILAAASNVIRGNESRLGKELWTAAENGEKVCLIGHWDGEEEARWIGEQI
EDLVNGNSPIAKRRQNSRSDQMMSEVERLDELGALKGLNSREQVLEKLKKHESFLAEAGR
ESLIWELTMRQQEGRSLEAAFPRFYLDEIAILVRASHQMRAFEDRFLTIGLPYKVIGGPR
FYERMEIRDAMAYFRLVVSPEDDLAFERIVNTPKRGLGDKAQQTIQMTARENGVSLVDGA
RIAVDNGLIKGKGGKALRELIDGLARWNAMTRGPRIEVDDESVIDDVSPMRFGAPEHTHI
ELAQIILDESGYTAHWLNDKTPEAPGRLENLKELVNQLDNFENLQGFLEHVSLVMDNEQD
SDGAKVSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRA
EEVCTISFAANRRVFGQWQNSMPSRFIDELPEDHVEVLTPPGLYGGGQHTAGIETRAVEA
NVYNSPGWRRLQARQGQHGMSQPKESRNTVIDATAVASFTLGERVFHQKFGYGAVIGIEG
DKVEVDFDKAGTKKVVSRFLSNKDDVPF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttgacgaaatgggcgccttcgagggcgcatcgctgtcggcgcgggcaatg
gctgcgcgcccttcgccctatctggatgagctgaacccggcacagcgcgatgcggtcgag
cggctggacggtccggttctgatgctggccggggctggcaccggcaagaccaaggcgctg
acggcccggatcgcacatcttctcaacactgcgcgcgcgcgtccgaatgagattctgtcg
gtcacattcaccaacaaggccgcgcgcgagatgaaagaacgggttggccgcctgctggga
cagcccgccgaggggatgccatggctgggtacgtttcattcgatctgcgtcaaactgctg
cgccgccatgcggaactggtcgatcttaaatcgaacttcaccattctggataaggacgac
cagattcgcctgctcaagcaattggtgcaggccgccaatatcgacgacaagcgctggccc
gcgcggatgctggccggcatcatcgacgactggaagaaccgcgctctgacacctgacaag
gtgcccactgccgatgccggggcctacaataacaagggcgtcgagctttacgctcaatac
cagacccgcttgcgcgaactgaatgcggtggatttcggcgatctgcttctgcacatggtt
acgatcttccagacccatcaggatgttctggagcaataccaacgctggttccgttatatc
ctcgtggatgagtatcaggacaccaacgtcgcccaatatctgtggctgcgcctgctggcc
ggggggcacaagaacatctgttgcgtcggcgatgacgatcagtcgatctatggctggcgc
ggggccgaggtgggcaacatcctgcgcttcgaaaaggactttcccggcgcgtatgtagtg
cgactggaacagaactatcgctcgaccccgcatattctggcggctgcgtcgaacgtcatt
cggggcaatgaaagccgcttgggcaaggagctttggacagctgctgaaaacggtgaaaag
gtctgccttatcggtcattgggacggtgaggaagaggcccgctggattggagagcagatc
gaagaccttgttaatggaaattctcccatcgctaaacgcaggcaaaactctcgatccgat
cagatgatgagtgaagtagagcgtctcgacgaactgggtgccctaaaggggctcaatagt
agagagcaagtactggaaaagctgaagaagcacgaaagttttttggcggaagcaggcagg
gaaagtctcatttgggaattaacaatgaggcaacaagaagggcgttctttggaagcggcc
ttcccaagattttatctcgatgaaatcgccatccttgtccgcgccagccaccagatgcgc
gccttcgaagacaggtttctgaccattggtttgccctacaaggtgatcggaggcccgcga
ttctacgagcggatggagatccgcgatgccatggcctatttccggctggtggtcagcccc
gaggatgatctggccttcgagcggatcgtgaacacccccaagcgcggccttggcgacaag
gcgcagcaaaccatccagatgaccgcgcgcgaaaatggggtgtcactggtcgacggggct
cggattgccgtcgataacgggttgatcaagggcaagggcggcaaggcgctgcgcgaactg
atcgacggtctggcgcgttggaatgcgatgacgcgtggaccacggattgaagtggacgac
gagtccgtgatcgatgacgtttcacccatgcggttcggtgcgcccgaacacacgcatatc
gagctggcgcagatcatcctcgacgaatccggttatacggcccattggctgaacgacaag
acgcccgaagcgccggggcgccttgaaaacctaaaggaactggtcaatcagctggacaat
ttcgagaacctgcaagggtttctggagcatgtcagtctggtgatggacaacgagcaggac
agcgacggggccaaggtctcgatcatgacccttcacgcggccaaggggctggagtttccc
gccgttttcctgccgggatgggaggacgggttgttcccctcgcaacggtcaatggacgaa
tccggcctcaaggggctcgaggaggaacgtcgcctggcctatgttggcatcacccgtgcc
gaggaggtgtgcacgatttcttttgccgccaaccggcgggtgttcgggcagtggcagaac
tccatgccatcccggttcatcgacgaattgccggaagatcacgttgaggtgctgactcct
ccgggtctttatggtggcggtcagcacactgcgggcattgaaacgcgtgcggtcgaagcc
aatgtctacaactcgccgggctggaggcggttgcaggcgcggcaggggcagcatggcatg
tcgcaacccaaagaaagccggaacacggtcatcgacgccaccgcagtggccagtttcaca
ctgggcgaacgggtgttccaccagaaattcggctatggtgcggtgatcgggatcgagggt
gacaaggtcgaggtcgacttcgacaaggccggcaccaagaaagtggtctcgcgttttctg
agcaacaaggatgacgtcccgttctga
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