KEGG   Ruegeria sp. AD91A: D1823_07060
Entry
D1823_07060       CDS       T05627                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rua  Ruegeria sp. AD91A
Pathway
rua03030  DNA replication
rua03430  Mismatch repair
rua03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1823_07060
   03430 Mismatch repair
    D1823_07060
   03440 Homologous recombination
    D1823_07060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rua03032]
    D1823_07060
   03400 DNA repair and recombination proteins [BR:rua03400]
    D1823_07060
Enzymes [BR:rua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1823_07060
DNA replication proteins [BR:rua03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1823_07060
DNA repair and recombination proteins [BR:rua03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1823_07060
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AXT26352
UniProt: A0A346SG39
LinkDB
Position
1408760..1410172
AA seq 470 aa
MLTGLSLRVRIFLFFCLLAFGGVAISATALWITYSRAGNPDLVNDFVFAEILIGFGLLAL
VAGVWLLFDDNVAKPIERLSAQLRARAHAGVSTDLDMQAARYLGDLAPAAAGLAEQLASN
AMRTAEAVAAETAHLAAEKQRLTALLTEIPVAMLLASPKHQIVLYDGQAAEVLAQIAHPR
LNASLFEYLEATGLTDAYAKMCKTGKDVYCTLSSVDGRQTYSARMKPLGDAPGYMLVFED
SAAHMSPDDARPLVYDFELLNTPGDDAFENRPLSDLCFVVFDTETTGLLPHKDEIVQIGA
VRVLNGKIVQGEHLDMLVDPGIPIPPASTKVHKISDRMVHGAPDIAEAGRVFHQFTRDAV
IVAHNAPFDMAFLRRHAKRMGVEWDHPILDTVLLSAVLFGASDTHTLDALCERLEITIPD
ALRHTALGDAVATAEALVKMLPILQARSLTTFGEVIMETRKHGRLLEDLN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcttaccgggttaagtctgagggtcaggatttttctgttcttctgcctccttgctttt
ggaggggttgcgataagtgccaccgctctctggatcacctattcccgcgcgggaaatccc
gatctggtgaatgatttcgtctttgctgaaatcctgatcggatttggattactggcactg
gttgcaggtgtttggctgctgtttgacgacaacgtcgccaaaccgatcgaacggctttcc
gcccagctgcgtgcccgtgctcatgccggtgttagcaccgacctcgacatgcaggccgcg
cgttatctgggcgatcttgccccggctgcagcgggattggcggaacaactcgcctcgaac
gccatgcgcacagccgaagccgtcgctgcggaaactgcgcatctggctgcggagaaacaa
cgcctgaccgccctgctgaccgagatcccggtggccatgctgctggccagtccgaagcat
cagatcgttctgtacgacgggcaggcagccgaggttcttgcccagatcgcgcatcctcgt
ctgaacgcgtctcttttcgagtatctcgaagccaccggcctgacagacgcttatgccaag
atgtgcaaaaccggaaaggacgtctattgcaccctgtccagcgtggatgggcggcagaca
tactccgcccggatgaaacccttgggcgatgcaccaggatatatgcttgtcttcgaagac
agcgcggcacatatgtcaccggacgatgcccgcccgctggtctatgatttcgaacttctc
aatacaccgggggatgacgcgttcgagaaccgccccctgtcggatctgtgcttcgtggtc
ttcgacacggaaacaaccggtttgctgcctcacaaggatgagattgtgcagatcggcgct
gtacgcgttctgaatggcaaaatcgttcagggtgagcatctggacatgctggttgatccc
ggcattccaattccacctgcctcgaccaaggtacacaagatcagcgaccgcatggttcat
ggcgcgccggatattgccgaagccgggcgcgttttccatcagttcacgcgtgacgcggtg
atcgtggcgcataacgccccgttcgacatggcgttcctgcgccgtcatgccaaacggatg
ggtgttgaatgggaccatccgatactcgacacggtcctactatctgcggtgctgttcggg
gccagcgatacacacacgctggacgccttgtgtgaacggttggaaattacgatccccgac
gctttgcgccatacagcactgggcgatgcggttgccacagccgaggcattggtcaagatg
ctgccgatcctgcaagcccgtagcctgacaacctttggcgaagtgattatggaaacccgt
aaacacggtcgtttgctggaagacctgaactga

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