Ruegeria sp. AD91A: D1823_07680
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Entry
D1823_07680 CDS
T05627
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rua
Ruegeria sp. AD91A
Brite
KEGG Orthology (KO) [BR:
rua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rua03000
]
D1823_07680
Transcription factors [BR:
rua03000
]
Prokaryotic type
Helix-turn-helix
Other families
D1823_07680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_16
AAA_22
HTH_AsnC-type
HTH_30
HTH_50
HTH_24
HTH_23
NACHT
AAA_5
TsaE
HTH_11
AAA
nSTAND3
Sigma70_r4
Xre-like-HTH
HTH_3
HTH_38
AAA_7
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
AXT26468
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Position
complement(1538297..1540039)
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AA seq
580 aa
AA seq
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MLDRQHSKEIDRVLSGFDTGRDRLVADSWQRCVETYGMDPSRQEPAHILPDTKFREHLEQ
SERLIATARSGLQSLFAQVAGQNYVLLLADADGVCVDFFGDRNFEDELRTAGLHLGFKWT
EELAGTNGVGSCIVTGQPVTIHQGDHFSITHTPLSCTAAPIFDTKGGLAAVLDVSLLRGP
SPKASQNLAMTLVTNSARRVEMANLMASTRRDWVLRFSASPEFLEVDPEAAVAVDGGGKI
IGMTSGARCALDPDGSGHLIGSQLQDWLEISVDDMPEFMRGRPSEDRVLHLKDGRALYGH
AVAPQTPQMTAALRKREQVLPGALGSFAGPDVGLQQLLNKAARLAPTNLPLLLTGESGTG
KTKLARAIHMADPATQDFHTVICCDTPTFSFCHAIEPGTLFLRGVEDLSEPAQASLLAVL
ERRADLRIIASCRQPPAGLQGGLREDLLHRIAGATLSLPPLRHRADLDWLIDRLLRRFAS
HDIRLSTAARADLKSRLWRGNIRELEHLLQSSVALCGDNIIDLTDLPAPALAPTQKQESD
DLETLLRACDWNMSQLARRLGVNRSTILRRMRKAGLKPPA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
ctgttggaccgccagcactcaaaagagattgaccgtgtcttaagcgggttcgatacaggg
cgagaccgacttgtcgcggatagctggcagcgctgtgttgaaacctacggaatggatccc
tcaagacaggaaccagcgcacatcctcccggacaccaaattccgtgaacatctggaacaa
tccgaacgtctgatcgcaacggcgcgttcggggctgcaatccctgtttgcgcaggtggca
gggcagaactacgtcctgctgcttgcggatgcagatggcgtctgcgttgatttctttggc
gaccggaacttcgaggacgagctcagaacagcgggtcttcatctaggattcaagtggacg
gaagagttggcaggaacgaacggggtggggtcgtgtatcgttacaggtcagccggttacg
attcatcaaggcgatcatttttcaattacgcatacgccgctgtcttgtacggcagcacca
atttttgacaccaaaggtggtcttgcggctgttctggatgtgtctttgttgcgtggaccc
tcgcctaaggcatcgcagaatctggccatgacattggtgacgaattccgcacgtcgcgtc
gagatggcaaacctgatggcatcgacccggcgcgattgggtcctgcgcttttctgccagc
cccgaatttcttgaggtcgatcctgaagcggcggttgcagtggacggaggcggcaagatc
atcggtatgacttcgggggcccgatgtgcactggacccggacggttcgggccacctgatc
gggtcgcaactgcaggactggcttgaaatcagtgttgatgacatgcccgaattcatgcgc
ggcagaccgtccgaagaccgcgttctacacctcaaggatgggcgcgcgctctatggtcat
gccgttgcgccacagacgccacagatgacggcagccctgcgcaaacgcgaacaggttctg
cctggtgcccttggcagctttgcggggccggatgtgggccttcagcaacttttgaacaag
gctgcccgtcttgcgccgacaaatctgccgcttttactgaccggtgaaagcgggacaggc
aaaaccaagctggcgcgcgcgatccatatggccgatcccgcgacacaggatttccacacc
gtgatctgctgcgacactccgacattcagcttctgccatgctatcgaacctggcacactg
ttcctgcgcggcgttgaagacctaagcgagcctgcgcaggcctctcttttggcagtgctt
gagcggcgcgctgatctgaggatcatcgcctcatgccggcagcccccggcaggattgcag
ggcggtctgcgtgaagatctgcttcaccggattgcgggggccacattgtctctgccgcct
ttgcgccaccgtgcggatttggattggctaattgatcgtctgctccgacggtttgccagc
catgatattcgcctgtcgaccgctgcccgcgccgatttgaaatcacggttgtggcgcgga
aatattcgtgaactggaacatctactgcaaagttcggtcgccctgtgtggggacaacatc
atcgacttaacggatttgcccgccccggcgctcgcccctacgcaaaagcaggaatcagat
gatctggaaacacttttgcgtgcttgcgattggaacatgtcccaactggcaaggcgcctt
ggtgtgaaccgatcgacgatcctgcgccgtatgcgaaaagccgggcttaaaccgcccgct
taa
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