KEGG   Ruegeria sp. AD91A: D1823_09710
Entry
D1823_09710       CDS       T05627                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rua  Ruegeria sp. AD91A
Brite
KEGG Orthology (KO) [BR:rua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rua03400]
    D1823_09710
Enzymes [BR:rua01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D1823_09710
    5.6.2.6  RNA 3'-5' helicase
     D1823_09710
DNA repair and recombination proteins [BR:rua03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D1823_09710
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 Sorb
Other DBs
NCBI-ProteinID: AXT26834
LinkDB
Position
1945435..1947846
AA seq 803 aa
MTQIPARIDTWFSTKGWSIHPHQQEMFDRAKDPSTLLIAPTGGGKTMAGFLPSLSELADG
GHGGLHTIYVSPLKALAADIKRNLRTPVDEIGLPIRIEDRTGDTSATQKKRQRANPPHIL
LTTPESLALLTSYEDSPRMFDGVQRIIVDEIHALAESKRGDQLILALARLQRLNPDLRRV
GLSATVEDPAAIAHFLARHPDPCRIVQADPGPDPDIHMLETTEMPPWSGGGAAYSIPAVL
EQIRRHKTTLIFHNTRAQAEIYFHNLWLANDDGLPIGVHHGSLDRQQRERVEAAMVRGDL
RAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKAILVPANRFEV
VECIAALEAAKAHDLDGEPRGPGPRDVLCQHILIAACAGPFDADDLYAEMTSAGPFAQLT
RPEFDACLDFCATGGYALRAYDRWQRLQQRADGQWQLRDPRATSRIRMNLGTIQDTDTLK
VRLKRSRGGKPLGEVEEAFAASLTPGDTFLIGGQIVRYEGLREMVVEVSRRADRKPKIAT
FSGTKFATSTQLSDRILRMFAQTDWPHLPSHTADWLDLQRQVSRLPQRDRLLIESFPSDG
REHLCVYGFAGRNAQQTLGLLLTKRMEETGLAPLGFVATDYATLIWGLDAVTDPRPLFQP
EALREGLDTWLAGNAVMKRTFRASATIAGLIERNTGGQRKSGRQATFSSDILYDTLLKYD
PDHLLMQITREEAMRGLVDFGRIEAMLARIGDRIDLLRLDHVSPLAAPLFLEVGKVPVKG
AAEERLLAEESARLLETAGLDQL
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgacgcagattcccgctcggattgatacgtggttttccaccaaaggctggtccatccac
ccacatcagcaagagatgttcgatcgggcgaaggacccgtcaaccttgctgatcgcccca
accggtggcggcaagaccatggccggttttctaccttccctgtcagagctggccgacggt
ggccatggcggattgcacacgatctatgtctctcccctgaaggccctggcagctgatatc
aaacgtaacctgcgcaccccggtggacgagatcggcctgcctattcggatcgaggatcgc
accggggacacctcagccacacagaagaaacgccaaagggccaacccgccccatatcctg
ctgaccacacccgaaagtctggcgctgctgacctcttacgaagattcgccgcgcatgttc
gacggcgtgcaacggatcatcgtcgacgaaatccacgcgctggcggaaagcaagcgcggc
gatcaactgatactggccctggcgcgtcttcagcgtctcaacccggatctgcgccgtgtt
ggtttgtcagccacggtcgaagaccccgcagcgattgcccactttctggcgcgccacccg
gacccctgccggatcgtgcaggccgaccccggcccggacccggacatacacatgctggaa
acaaccgaaatgccgccctggtccggcggcggtgcggcttattcgattccggcagtgttg
gaacaaatccggcggcacaagaccacgctgatctttcacaacacccgcgcgcaggccgag
atctactttcacaatctgtggttggcaaatgacgacggcctgcccatcggtgtccatcat
ggcagtcttgaccgacagcaacgcgagcgggtcgaggcagcgatggtgcgtggcgacttg
cgtgctatagtctgcaccggctcgctggatctgggcattgattggggcgatgtcgatctg
gtgattcagatcggtgcgcccaagaacgtcaaacggctggtgcaaaggattggacgagcc
aaccaccgctataacgcgccttccaaggcaatactggtgcctgctaaccggtttgaagtt
gtcgaatgcattgcagcgctcgaggctgccaaggctcatgacctggacggggaaccccga
ggccccggccctcgcgatgtgttgtgccagcacattctgattgcggcctgcgccgggcct
tttgacgccgatgacctttatgctgagatgacatccgccgggccttttgcgcagttgacg
cgacccgagtttgacgcctgtctggatttctgtgccaccgggggttacgccttgcgcgcc
tatgatcgctggcaaagattgcagcagcgtgccgacgggcaatggcaattgcgcgatcct
cgcgcaacgtcacgcattcgcatgaacttgggcacgattcaggataccgacaccctgaag
gtacgcctgaagcgcagccgtggtggaaaaccgttgggagaagttgaagaagcctttgct
gcctcgctgacccccggcgataccttcctgatcggtgggcagatcgtgcgctatgagggc
ctgcgcgaaatggtggtcgaagtcagccgtcgcgcagatcgcaaaccaaagatcgcgacc
ttctcgggtacgaagtttgcaacctccacgcaactcagtgaccgcattctgcgcatgttc
gcccaaactgactggccgcacctgccttcacacacggctgattggttggacttacagcgc
caagtgtctcgcctgcctcagcgcgatcgtttgctgatcgaaagctttccaagtgacggg
cgggagcatctgtgcgtttacggtttcgccgggcgcaacgcgcaacagacattgggcctg
ctgctgacaaagcgaatggaggaaaccggtttggccccgttggggtttgtagccacagac
tatgccacgctgatttgggggctggacgcagtcactgaccctcgccctttgtttcaaccc
gaagcgctgcgtgaggggctggacacctggctggcaggcaacgcggttatgaagcgtacc
tttcgcgcgtcggcaacaattgccggtctgatcgaacgcaacacgggcgggcaacgcaaa
agcggacggcaagccacattttcgtcggatattctctatgacacactactgaaatatgat
cccgatcatctgttgatgcagatcactcgcgaagaagccatgcgcgggctggttgacttc
ggtcgtatcgaggcgatgctggcccgcatcggagaccgcatcgacctgctgcgtctggac
cacgtttccccacttgccgcgccgctgtttcttgaagttggaaaggtgcctgtcaaaggt
gcagccgaggaaaggctgcttgcagaagaaagcgcgcgcctgcttgagaccgccgggttg
gaccagctttga

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