Ruegeria sp. AD91A: D1823_19020
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Entry
D1823_19020 CDS
T05627
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rua
Ruegeria sp. AD91A
Pathway
rua03030
DNA replication
rua03430
Mismatch repair
rua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1823_19020
03430 Mismatch repair
D1823_19020
03440 Homologous recombination
D1823_19020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rua03032
]
D1823_19020
03400 DNA repair and recombination proteins [BR:
rua03400
]
D1823_19020
Enzymes [BR:
rua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1823_19020
DNA replication proteins [BR:
rua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1823_19020
DNA repair and recombination proteins [BR:
rua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1823_19020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
AXT29310
LinkDB
All DBs
Position
unnamed1:114140..117640
Genome browser
AA seq
1166 aa
AA seq
DB search
MSSSPRFIHLRVHTEYSLLEGAVRLKKLPGLCEKMEMPAVAVTDTNSMFSALEFAVTSSG
AGVQPIMGCQVDLTYVKAQPGEKPKTPAPLVLLAQSETGYENLMKLSTCLYVDKGGQLPQ
VTLEELAERSEGLICLSGGPDGPVGMLLQQGQRPAAEALVDRLAAMFPNRFYIELQRHPG
EDGQPEAERLTERGHIEMAYAKNLPLVATNDVYFPIPDMYEAHDALICISEGAYVDQQEG
RRRLTAQHYFKSQQEMATLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQKRLAVIPHAVTPEEYQERLDFELGIIEGMGFPGYFLIVADFIQWAKDQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QQKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALK
DEPRLRESAREEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPIYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFKSGRPLHIAADGTELYEPAEGAE
NQINAIPLDDEATYKLYSAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLRKIESVHPLIDYILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEKGAGENGVDAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLELPYVPPCVNRSLSTFDVVNGK
LVYALGALKNVGVEAMNLVVKGRADKPFVNLFDFARRVDLKKVGKRPLEMLARAGAFDEL
DKNRRRVFESFDRLVQYSAAIHEQKNSNQVSLFGEAGDDLPEPRLSPTPDWLPAERLSEE
FKAIGFYLSGHPLDDYMPALKRKKVMTLDEVTEKARSGPLIAKMAGVVAGRQERKSAKGN
RFAFAQLSDPTGAYEVTLFSDTLEKCREFLETGAQVVLTAEATMEADQLKLLGRSVGPAD
SLVAEAGATGLRIYVDEAQAVPSVAKVLEDAASAAKGAARGPIQFMLLDPSLPGDVEMDL
GREFPINPQIKGAVKSLEGVMTVEEI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctccacgattcattcacctccgcgttcacactgaatattcccttctggaa
ggcgccgtgcggctgaaaaagctgccgggtctgtgcgagaagatggagatgccagccgtt
gccgtgacggataccaattcgatgttttcggcgctggaattcgcggtcacctcaagcggg
gccggggtgcagccgatcatggggtgccaggttgatctgacctatgtcaaggcccagccc
ggcgagaagccgaagacacccgcgcctctggtgctgctggcgcagtccgagaccgggtac
gaaaacctgatgaagctcagcacttgtctctacgtggacaagggcgggcaactgcctcag
gtcactttggaagaattggctgaacgatctgaaggattgatctgcctgtccggtggaccc
gacggcccggtcgggatgctgctgcaacagggccagcgtcctgcggccgaagcattggtc
gaccggctcgcggcaatgttccctaaccggttttatatcgaactccagcgccatccgggt
gaggatggccagcccgaggcagagagactgaccgaacgtggccatatcgagatggcgtat
gccaagaacctgccgctggtcgccacgaatgacgtctatttcccgataccggacatgtac
gaagctcacgacgcgctgatctgcatatcggaaggggcctatgtcgaccagcaggaaggc
cgccgccgcctgacggctcagcattacttcaagtcacaacaagagatggcgaccctgttc
gccgacttgcccgaggccatcgaaaacaccgtcgagatcgccaaacgctgcgcgttcatg
gcctatcgacgcgacccgatcctgccgaaattcgctgatgatgaggttgccgaactgcgt
cgcatcgcaaatgagggcttgcagaaacgactggcggtgatcccgcatgccgtgacgcct
gaagagtatcaggaacggctggatttcgaactgggcatcatcgaagggatgggtttccct
ggttacttcctgatcgttgcggactttattcaatgggccaaggatcaggacattcccgtc
gggccggggcggggatcgggtgcgggatcgctggttgcctatgcgttgacgatcaccgac
cttgatccgctgcgctacagcctgctgttcgaacgcttcctgaaccccgagcgggtctcg
atgcccgacttcgacatcgacttctgcatggaccgccgcgaagaggtgatccgctatgtt
cagcaaaaatacgggcgcgacaaggtggggcagatcatcactttcggcgcattgctgtca
aaagccgctgtacgcgatatcgggcgggtgttgcaaatgccgtatgggcaggtggatcgc
ctgtcaaagatgatcccggttgagggagtgaaacctgtctccatcgaaaaggcgctgaaa
gacgaaccacgcctgcgcgagtccgcgcgcgaggaagaggtggtcgaccggttgctgacc
tacggccagcaggtcgagggactgttgcggaatgcttcgacccacgcggcaggggtggtg
atcggcgaccggcctctggatgcgctggtgccgatctatcaggacccgcgttccgatatg
cccgcgacccagttcaacatgaaatgggttgaacaggccgggctggtgaagttcgacttt
ctgggcctgaagacgctgaccgtgatccagaacgcaatggacctgatcttcaagtctggg
cgtccattgcacatcgccgccgatggcaccgagctttatgaacccgctgagggggccgaa
aaccagatcaacgccataccgctggatgatgaggcgacatataagctttactcagcagcc
aagaccgtggcggtgttccaggttgaaagttcgggcatgatggatgcactcaagcgcatg
aaacccacctgcatcgaggatattgtggctcttgtggcgctgtatcgtcccggcccgatg
gagaatatcccgacctattgcgaggtcaagaacggattacgcaagatcgagtccgtgcat
cctctgatcgactatatccttgaggaaacgcagggcatcatcgtctatcaggagcaggtg
atgcagatcgcgcaggtcatggcgggctactcgttgggcggcgccgacctgctgcgccgc
gcgatgggtaaaaagatcaaagaggcgatggacgccgaacgcccaaaattcgaaaagggc
gcaggtgagaacggcgtggatgccaagaaggcctccgaagtattcgacctgctggagaaa
ttcgccaactacggcttcaacaaatcccacgccgcggcctatgcggtggtcagctatcag
accggatggctcaaggcgaaccacccggtcgagttcatggccggtgtcatgaactgcgat
atccatctgacggacaagctggcggtgtatttcgaagaagtgcgcaagggactggaattg
ccctacgtgccgccatgcgtgaatcgctcactgtcgacgtttgacgttgtgaacggcaaa
ctggtttacgcgctgggcgctttgaaaaacgtgggcgtcgaggcgatgaatcttgtggtt
aaagggcgcgccgacaagccgtttgtcaatctgttcgactttgcccgccgagtggatcta
aaaaaagtcggcaaacgtccgctggaaatgttggcgcgtgccggggcctttgacgagctc
gacaagaaccgtcgccgcgtgttcgaaagctttgaccgcctggtacagtattcggcggcc
atccatgaacagaaaaactccaatcaggtgtctttgttcggtgaggccggagacgacctg
cctgaaccacgcctgtcgccgacgccggactggctgccggccgagcgcctcagcgaagaa
ttcaaggccatcggcttttacctctcagggcacccgctggacgattacatgcctgcgctg
aaacgaaaaaaggtgatgacgctggatgaggttacggaaaaggcccggtctggtccgctg
atcgccaagatggccggggttgtcgccgggcggcaggagcggaaatcggccaagggcaac
cgctttgctttcgctcagctgtctgatcccaccggcgcatatgaggtgacgctgttttcg
gacacattggaaaagtgccgcgagtttctggaaaccggtgcgcaggtggttctgaccgcc
gaggcgacgatggaagccgatcagctcaagctgctgggccgctcggttggcccggcggat
tcccttgtggccgaggccggggcaaccgggctgcgaatttacgttgacgaagcgcaggct
gtgccttcggtcgccaaggtgctggaagacgccgcctctgccgcgaaaggggctgcaagg
gggccaatccagttcatgttgctggacccaagcctgcccggcgatgtcgaaatggatctg
gggcgcgagttcccgatcaaccctcagatcaagggcgcggtcaaatcgctggagggcgtg
atgaccgtcgaagagatctga
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