Rubrobacter tropicus: GBA63_00400
Help
Entry
GBA63_00400 CDS
T06510
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rub
Rubrobacter tropicus
Pathway
rub00300
Lysine biosynthesis
rub00470
D-Amino acid metabolism
rub01100
Metabolic pathways
rub01110
Biosynthesis of secondary metabolites
rub01120
Microbial metabolism in diverse environments
rub01230
Biosynthesis of amino acids
Module
rub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
rub_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBA63_00400 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GBA63_00400 (lysA)
Enzymes [BR:
rub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GBA63_00400 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIN81247
UniProt:
A0A6G8Q4J9
LinkDB
All DBs
Position
80437..81687
Genome browser
AA seq
416 aa
AA seq
DB search
MDDFYYEGDGLRCEGVALEEIAHAVGTPTYVYSHAAIEKAYNELDEAFSGLDHLVCYAVK
ANGNLAVLRALASLGAGADIVSGGELYRAMRAGFDPKKVVFAGVGKTEQELMAGLGERIL
LFNVESASELERLEQIAARFGKRARVSLRVNPDVDAGSHDHITTGRERDKFGIPVDQALA
LAERAKEYGCVDIIGVHQHIGSQITKLDPFKDSVERSAGLVDELKARHFDIRYFNIGGGL
GIRYKDEETPTPGELVEAIRPTLEASGTKILCEMGRFISGAAGVLLTGVVYRKKSGEKDF
IVADAGMNDLLRPSLYDAHHEIRAVKQNGSVTGADLVGPVCESGDYLARDRELPDAQEGD
LLAVMGAGAYGFSMASNYNSRPRPAEVMVSGDRWAVVREREHYADLVKGELVPAFL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacttctactacgagggggacggcctccgctgcgagggggtcgcgctcgaggag
atcgcgcacgcggtcggaacacctacctacgtctacagccacgccgccatcgagaaagcc
tacaacgaactcgacgaggccttctcgggcctcgaccacctggtctgctacgcggtcaag
gcgaacgggaacctcgcggtgctgcgggctctcgcctctctcggggccggggcggacata
gtctctgggggggagctctaccgggcgatgcgggccgggttcgaccccaagaaggtggtc
ttcgcgggcgtgggcaagaccgagcaggagctcatggccggtctcggggagcgcatcctg
ctcttcaacgtcgagtcggcctccgagttggagcgactggagcagatcgcggcccgcttc
ggcaagcgcgcccgcgtctcgttgcgggtcaaccccgacgtggacgccggcagccacgac
cacatcacgacagggagggagcgagacaagttcggcatcccggtggaccaggcgctggcg
ctcgccgagagggccaaagagtacggttgcgtggacatcatcggggtgcaccagcacata
gggtcccagatcaccaagctggaccccttcaaggactccgtcgagaggtcggccggcctg
gtcgacgagctgaaagcccgtcacttcgacatccggtacttcaacatcgggggcggcctc
ggcatccggtacaaggacgaggagacgccgacgcccggggagttggtcgaagccatccgc
ccgacgctggaggcctcggggacgaagatcctatgcgagatgggccgctttatctcgggc
gccgccggcgtgttgctgacgggcgtcgtctaccgcaagaagagcggcgagaaggacttc
atagtcgccgacgccgggatgaacgacctgttgcgaccgagcctctacgacgcccaccac
gagatccgggccgtaaaacagaacggctccgtgacgggcgccgacctcgtgggccccgtc
tgcgagtccggcgactacctggcccgcgaccgcgagcttcccgatgcccaagaaggcgac
ctcctcgccgtcatgggcgccggcgcctacggcttctcgatggcctcgaactacaactcc
cgtccccggccggcggaggtcatggtaagcggcgaccgctgggccgtggtgagggagcgc
gagcactacgcggacctggtaaagggcgagctggtgccggcgtttttgtag
DBGET
integrated database retrieval system