Rubrobacter tropicus: GBA63_01405
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Entry
GBA63_01405 CDS
T06510
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBA63_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_01405
Enzymes [BR:
rub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GBA63_01405
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBA63_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF188
Zn_ribbon_ACC
Motif
Other DBs
NCBI-ProteinID:
QIN81432
UniProt:
A0A6G8Q4M6
LinkDB
All DBs
Position
319477..320124
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AA seq
215 aa
AA seq
DB search
MDSLFDAADGGENREKRLEDLARQVSVCTKCDLAMTRTNTVFASGDPHSPLMLVGEGPGE
NEDATGLPFVGRAGKLLDDILAAVDLTRDQVYLTNTVKCRAAVAEGGRMRNRPPKTTEIR
ACNPYLQGQMEAVKPEIVLCLGGPAAKTLIDKDFRITKDRGKWYDLDNGARAMATFHPAY
VLRQRGDDLDNTKRLVWKDIQNVYAEYQKAMEERG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttggacagtctcttcgacgcagcggacggcggcgagaaccgcgaaaaaaggctcgaagac
ctcgcgcgtcaggtctccgtctgcacgaaatgcgacctcgcgatgacccgcacgaacacg
gtcttcgccagcggcgacccgcactccccgctgatgctcgtcggcgaggggccgggggag
aacgaggacgccacgggcctgcccttcgtcggccgggccggcaagctcctcgacgacatc
ctcgccgcggtggacctcacccgcgaccaggtctacctgacgaacaccgtcaagtgccgg
gccgccgtggcggagggcggccggatgagaaaccgaccgccgaagaccacggagatccgg
gcctgcaacccctacctccagggccagatggaggcggtaaaacccgagatcgtgctctgc
ctcggcggccccgccgcgaagaccctcatagataaggatttcaggatcacgaaagaccgc
ggcaagtggtacgacctggacaacggcgcgagggcgatggcgaccttccacccggcctac
gtcctgcgccagcgcggcgacgacctcgacaacaccaaacgcctggtctggaaagacatc
cagaacgtctacgccgaataccagaaggcgatggaagagcggggataa
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