KEGG   Rubrobacter tropicus: GBA63_02335
Entry
GBA63_02335       CDS       T06510                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
rub  Rubrobacter tropicus
Pathway
rub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GBA63_02335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rub03019]
    GBA63_02335
Enzymes [BR:rub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     GBA63_02335
Messenger RNA biogenesis [BR:rub03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     GBA63_02335
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 DZR_2
Other DBs
NCBI-ProteinID: QIN81593
UniProt: A0A6G8Q577
LinkDB
Position
513182..514723
AA seq 513 aa
MVMMADVKKLEIPEPVVRLGEAFRGAGHELYLVGGYVRDRLLGGHEEAKPDADATTGARP
AEIKRLLRPLADDLWAVGERFGTIGATVGGYAVEVTTYRSDLYTEGSRHPEVRFGDSLVE
DLARRDFTINAIAADALTGEISDPFEGRKDLESGVIRPVGDPLDRMRDDPLRMLRAVRFE
TTLSKPDKPFALTTDLEKAIRENARWLESISAERIREEFEKVLLSENVTAGLRALVRLGL
MPYIVPEFMETLKVEQEAEFHHKDVFEHTLIVVQNVENTPVLRKAAFFHDIGKPRTLVYE
HRCTYCGAKSAQKTTGEGECEVCRGRTIPKKIHFYGHENVGAGIARRAMKRLAYPKDDTD
AVSHLVAHHMRPMGYAVGRDPWSDSAVRRFVRDTYLARGDKVLADVDMLLKLARADITGS
APRRRRVAEASWQSLKDRVDEVRAEDSIERLESPLDGNDLMRMFDRPPGRWIKPIKDHLQ
GEVIEGRLAKDDTGTARQLAEAFAREHDLFGEE
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggttatgatggccgacgtaaaaaagctggagattcccgagcccgtcgttcgcctcggc
gaggcgttccggggggcggggcacgagctgtacctcgtcggcgggtacgtgcgggacaga
ttgctcggtggtcacgaggaggcgaagccggacgccgacgcgacgaccggagcgcggccg
gcggagataaagcgcctgctccggcccctcgccgacgatttgtgggccgtcggggagcgc
tttgggaccataggggcgacggtcggcggctacgcggtggaggtcactacttacaggagc
gacctctacacggaggggagccggcaccccgaggtccgcttcggggacagcctggtcgag
gacctggcccggcgggacttcaccataaacgcaatcgcggccgatgcccttacgggggag
atctccgaccccttcgagggcaggaaggaccttgagagcggcgtgatccgtccggtggga
gacccgctcgaccggatgcgcgacgaccccttgcggatgctccgcgccgtccgcttcgag
acgaccctgtcgaaaccggacaaacccttcgccctcacgacggacctggagaaggccatt
cgggagaacgcccgctggctcgagagcataagcgcagagcgcatccgggaggagttcgag
aaggtccttctctccgagaacgtaacggccggcctgcgggccctggtgcgcctggggctc
atgccctacatcgtgcccgagttcatggagaccttgaaggtcgagcaggaggcggagttc
caccacaaggacgtcttcgagcacaccctgattgtggtccagaacgtcgagaataccccg
gtcttgcgcaaggccgcctttttccacgacatcggcaagccccgcaccctcgtctacgag
caccgctgcacctactgcggcgccaagagcgcgcagaagactaccggagagggggagtgc
gaggtctgcagggggcgcacgatcccgaagaagatccacttctacggccacgagaacgtg
ggcgccggcatcgcgcggcgggcgatgaagcgtctggcctacccgaaggacgacaccgac
gccgtctcccacctcgtcgcccaccacatgcggccgatgggctacgccgtggggcgcgac
ccgtggagcgattcggccgtcaggcgcttcgtcagggacacgtacctcgcccgcggggac
aaagtactcgccgacgtggacatgctgctcaagctcgcccgggccgacatcacggggagc
gcgccgagaagacggcgcgtcgcagaggcctcgtggcagagcctcaaggacagggtggac
gaggtccgggccgaggactccatcgagaggttggagagcccgctcgacggcaacgacctg
atgcggatgttcgaccggcctccggggcgttggatcaagcccataaaagaccaccttcag
ggcgaggttatagaaggccgcctcgccaaggacgacacagggacggcccgccaactggcc
gaggccttcgcccgggagcacgacctcttcggagaggagtag

DBGET integrated database retrieval system