Rubrobacter tropicus: GBA63_02335
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Entry
GBA63_02335 CDS
T06510
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBA63_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rub03019
]
GBA63_02335
Enzymes [BR:
rub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GBA63_02335
Messenger RNA biogenesis [BR:
rub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GBA63_02335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QIN81593
UniProt:
A0A6G8Q577
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All DBs
Position
513182..514723
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AA seq
513 aa
AA seq
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MVMMADVKKLEIPEPVVRLGEAFRGAGHELYLVGGYVRDRLLGGHEEAKPDADATTGARP
AEIKRLLRPLADDLWAVGERFGTIGATVGGYAVEVTTYRSDLYTEGSRHPEVRFGDSLVE
DLARRDFTINAIAADALTGEISDPFEGRKDLESGVIRPVGDPLDRMRDDPLRMLRAVRFE
TTLSKPDKPFALTTDLEKAIRENARWLESISAERIREEFEKVLLSENVTAGLRALVRLGL
MPYIVPEFMETLKVEQEAEFHHKDVFEHTLIVVQNVENTPVLRKAAFFHDIGKPRTLVYE
HRCTYCGAKSAQKTTGEGECEVCRGRTIPKKIHFYGHENVGAGIARRAMKRLAYPKDDTD
AVSHLVAHHMRPMGYAVGRDPWSDSAVRRFVRDTYLARGDKVLADVDMLLKLARADITGS
APRRRRVAEASWQSLKDRVDEVRAEDSIERLESPLDGNDLMRMFDRPPGRWIKPIKDHLQ
GEVIEGRLAKDDTGTARQLAEAFAREHDLFGEE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggttatgatggccgacgtaaaaaagctggagattcccgagcccgtcgttcgcctcggc
gaggcgttccggggggcggggcacgagctgtacctcgtcggcgggtacgtgcgggacaga
ttgctcggtggtcacgaggaggcgaagccggacgccgacgcgacgaccggagcgcggccg
gcggagataaagcgcctgctccggcccctcgccgacgatttgtgggccgtcggggagcgc
tttgggaccataggggcgacggtcggcggctacgcggtggaggtcactacttacaggagc
gacctctacacggaggggagccggcaccccgaggtccgcttcggggacagcctggtcgag
gacctggcccggcgggacttcaccataaacgcaatcgcggccgatgcccttacgggggag
atctccgaccccttcgagggcaggaaggaccttgagagcggcgtgatccgtccggtggga
gacccgctcgaccggatgcgcgacgaccccttgcggatgctccgcgccgtccgcttcgag
acgaccctgtcgaaaccggacaaacccttcgccctcacgacggacctggagaaggccatt
cgggagaacgcccgctggctcgagagcataagcgcagagcgcatccgggaggagttcgag
aaggtccttctctccgagaacgtaacggccggcctgcgggccctggtgcgcctggggctc
atgccctacatcgtgcccgagttcatggagaccttgaaggtcgagcaggaggcggagttc
caccacaaggacgtcttcgagcacaccctgattgtggtccagaacgtcgagaataccccg
gtcttgcgcaaggccgcctttttccacgacatcggcaagccccgcaccctcgtctacgag
caccgctgcacctactgcggcgccaagagcgcgcagaagactaccggagagggggagtgc
gaggtctgcagggggcgcacgatcccgaagaagatccacttctacggccacgagaacgtg
ggcgccggcatcgcgcggcgggcgatgaagcgtctggcctacccgaaggacgacaccgac
gccgtctcccacctcgtcgcccaccacatgcggccgatgggctacgccgtggggcgcgac
ccgtggagcgattcggccgtcaggcgcttcgtcagggacacgtacctcgcccgcggggac
aaagtactcgccgacgtggacatgctgctcaagctcgcccgggccgacatcacggggagc
gcgccgagaagacggcgcgtcgcagaggcctcgtggcagagcctcaaggacagggtggac
gaggtccgggccgaggactccatcgagaggttggagagcccgctcgacggcaacgacctg
atgcggatgttcgaccggcctccggggcgttggatcaagcccataaaagaccaccttcag
ggcgaggttatagaaggccgcctcgccaaggacgacacagggacggcccgccaactggcc
gaggccttcgcccgggagcacgacctcttcggagaggagtag
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